Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23888 | 71887;71888;71889 | chr2:178574470;178574469;178574468 | chr2:179439197;179439196;179439195 |
N2AB | 22247 | 66964;66965;66966 | chr2:178574470;178574469;178574468 | chr2:179439197;179439196;179439195 |
N2A | 21320 | 64183;64184;64185 | chr2:178574470;178574469;178574468 | chr2:179439197;179439196;179439195 |
N2B | 14823 | 44692;44693;44694 | chr2:178574470;178574469;178574468 | chr2:179439197;179439196;179439195 |
Novex-1 | 14948 | 45067;45068;45069 | chr2:178574470;178574469;178574468 | chr2:179439197;179439196;179439195 |
Novex-2 | 15015 | 45268;45269;45270 | chr2:178574470;178574469;178574468 | chr2:179439197;179439196;179439195 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.97 | N | 0.841 | 0.326 | 0.272205846399 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0829 | likely_benign | 0.0893 | benign | -0.795 | Destabilizing | 0.489 | N | 0.58 | neutral | N | 0.354228617 | None | None | N |
S/C | 0.0745 | likely_benign | 0.0816 | benign | -0.364 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
S/D | 0.8758 | likely_pathogenic | 0.8929 | pathogenic | -0.418 | Destabilizing | 0.86 | D | 0.73 | prob.delet. | None | None | None | None | N |
S/E | 0.905 | likely_pathogenic | 0.9292 | pathogenic | -0.232 | Destabilizing | 0.86 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/F | 0.4837 | ambiguous | 0.5093 | ambiguous | -0.842 | Destabilizing | 0.956 | D | 0.849 | deleterious | None | None | None | None | N |
S/G | 0.1936 | likely_benign | 0.1837 | benign | -1.18 | Destabilizing | 0.86 | D | 0.716 | prob.delet. | None | None | None | None | N |
S/H | 0.802 | likely_pathogenic | 0.8355 | pathogenic | -1.429 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
S/I | 0.1711 | likely_benign | 0.1799 | benign | 0.182 | Stabilizing | 0.754 | D | 0.789 | deleterious | None | None | None | None | N |
S/K | 0.9857 | likely_pathogenic | 0.9886 | pathogenic | 0.272 | Stabilizing | 0.86 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/L | 0.1622 | likely_benign | 0.1683 | benign | 0.182 | Stabilizing | 0.698 | D | 0.765 | deleterious | N | 0.38375373 | None | None | N |
S/M | 0.2678 | likely_benign | 0.2818 | benign | 0.072 | Stabilizing | 0.978 | D | 0.831 | deleterious | None | None | None | None | N |
S/N | 0.4323 | ambiguous | 0.4583 | ambiguous | -0.344 | Destabilizing | 0.86 | D | 0.714 | prob.delet. | None | None | None | None | N |
S/P | 0.8808 | likely_pathogenic | 0.8688 | pathogenic | -0.11 | Destabilizing | 0.97 | D | 0.841 | deleterious | N | 0.481347353 | None | None | N |
S/Q | 0.8984 | likely_pathogenic | 0.92 | pathogenic | -0.12 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
S/R | 0.9783 | likely_pathogenic | 0.9818 | pathogenic | -0.153 | Destabilizing | 0.978 | D | 0.839 | deleterious | None | None | None | None | N |
S/T | 0.0764 | likely_benign | 0.0848 | benign | -0.174 | Destabilizing | 0.025 | N | 0.329 | neutral | N | 0.388975909 | None | None | N |
S/V | 0.1419 | likely_benign | 0.1584 | benign | -0.11 | Destabilizing | 0.019 | N | 0.625 | neutral | None | None | None | None | N |
S/W | 0.7384 | likely_pathogenic | 0.7549 | pathogenic | -0.946 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
S/Y | 0.4426 | ambiguous | 0.4774 | ambiguous | -0.501 | Destabilizing | 0.978 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.