Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23891 | 71896;71897;71898 | chr2:178574461;178574460;178574459 | chr2:179439188;179439187;179439186 |
N2AB | 22250 | 66973;66974;66975 | chr2:178574461;178574460;178574459 | chr2:179439188;179439187;179439186 |
N2A | 21323 | 64192;64193;64194 | chr2:178574461;178574460;178574459 | chr2:179439188;179439187;179439186 |
N2B | 14826 | 44701;44702;44703 | chr2:178574461;178574460;178574459 | chr2:179439188;179439187;179439186 |
Novex-1 | 14951 | 45076;45077;45078 | chr2:178574461;178574460;178574459 | chr2:179439188;179439187;179439186 |
Novex-2 | 15018 | 45277;45278;45279 | chr2:178574461;178574460;178574459 | chr2:179439188;179439187;179439186 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.867 | 0.873 | 0.841522787196 | gnomAD-4.0.0 | 3.18331E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71844E-06 | 0 | 0 |
L/P | None | None | 1.0 | D | 0.835 | 0.907 | 0.934807757574 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9641 | likely_pathogenic | 0.9536 | pathogenic | -2.399 | Highly Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
L/C | 0.9018 | likely_pathogenic | 0.8719 | pathogenic | -2.39 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -2.519 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/E | 0.9935 | likely_pathogenic | 0.991 | pathogenic | -2.413 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/F | 0.6377 | likely_pathogenic | 0.5938 | pathogenic | -1.889 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.663815418 | None | None | N |
L/G | 0.9904 | likely_pathogenic | 0.9868 | pathogenic | -2.8 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/H | 0.9767 | likely_pathogenic | 0.9704 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.680641996 | None | None | N |
L/I | 0.3237 | likely_benign | 0.2964 | benign | -1.293 | Destabilizing | 0.999 | D | 0.82 | deleterious | D | 0.625427888 | None | None | N |
L/K | 0.9846 | likely_pathogenic | 0.9824 | pathogenic | -1.756 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/M | 0.3972 | ambiguous | 0.3686 | ambiguous | -1.393 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/N | 0.9868 | likely_pathogenic | 0.9819 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/P | 0.9921 | likely_pathogenic | 0.9886 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.680641996 | None | None | N |
L/Q | 0.9639 | likely_pathogenic | 0.9518 | pathogenic | -2.042 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/R | 0.9736 | likely_pathogenic | 0.9679 | pathogenic | -1.225 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.664622635 | None | None | N |
L/S | 0.9915 | likely_pathogenic | 0.9873 | pathogenic | -2.655 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/T | 0.9701 | likely_pathogenic | 0.9604 | pathogenic | -2.416 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/V | 0.4715 | ambiguous | 0.4113 | ambiguous | -1.639 | Destabilizing | 0.999 | D | 0.826 | deleterious | D | 0.58305248 | None | None | N |
L/W | 0.9622 | likely_pathogenic | 0.9452 | pathogenic | -2.016 | Highly Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/Y | 0.9578 | likely_pathogenic | 0.944 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.