Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23893 | 71902;71903;71904 | chr2:178574455;178574454;178574453 | chr2:179439182;179439181;179439180 |
N2AB | 22252 | 66979;66980;66981 | chr2:178574455;178574454;178574453 | chr2:179439182;179439181;179439180 |
N2A | 21325 | 64198;64199;64200 | chr2:178574455;178574454;178574453 | chr2:179439182;179439181;179439180 |
N2B | 14828 | 44707;44708;44709 | chr2:178574455;178574454;178574453 | chr2:179439182;179439181;179439180 |
Novex-1 | 14953 | 45082;45083;45084 | chr2:178574455;178574454;178574453 | chr2:179439182;179439181;179439180 |
Novex-2 | 15020 | 45283;45284;45285 | chr2:178574455;178574454;178574453 | chr2:179439182;179439181;179439180 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs777818650 | None | 0.067 | N | 0.225 | 0.118 | 0.112648838833 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/E | rs777818650 | None | 0.067 | N | 0.225 | 0.118 | 0.112648838833 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/E | rs777818650 | None | 0.067 | N | 0.225 | 0.118 | 0.112648838833 | gnomAD-4.0.0 | 1.05362E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35632E-05 | 0 | 1.60123E-05 |
D/N | rs753690633 | -0.029 | 0.988 | N | 0.732 | 0.363 | 0.240491677333 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.56E-05 | 0 |
D/N | rs753690633 | -0.029 | 0.988 | N | 0.732 | 0.363 | 0.240491677333 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
D/N | rs753690633 | -0.029 | 0.988 | N | 0.732 | 0.363 | 0.240491677333 | gnomAD-4.0.0 | 1.54942E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.11929E-05 | 0 | 0 |
D/V | rs1449843654 | 0.092 | 0.994 | N | 0.686 | 0.507 | 0.544037764837 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/V | rs1449843654 | 0.092 | 0.994 | N | 0.686 | 0.507 | 0.544037764837 | gnomAD-4.0.0 | 8.21141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07948E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1949 | likely_benign | 0.1982 | benign | -0.62 | Destabilizing | 0.958 | D | 0.627 | neutral | N | 0.433956051 | None | None | N |
D/C | 0.7329 | likely_pathogenic | 0.7131 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
D/E | 0.2003 | likely_benign | 0.1983 | benign | -0.587 | Destabilizing | 0.067 | N | 0.225 | neutral | N | 0.303298365 | None | None | N |
D/F | 0.8106 | likely_pathogenic | 0.7774 | pathogenic | -0.598 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
D/G | 0.291 | likely_benign | 0.2809 | benign | -0.848 | Destabilizing | 0.958 | D | 0.65 | neutral | N | 0.476421535 | None | None | N |
D/H | 0.46 | ambiguous | 0.4207 | ambiguous | -0.67 | Destabilizing | 0.998 | D | 0.652 | neutral | N | 0.48234743 | None | None | N |
D/I | 0.5843 | likely_pathogenic | 0.56 | ambiguous | -0.052 | Destabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | N |
D/K | 0.5918 | likely_pathogenic | 0.5613 | ambiguous | -0.015 | Destabilizing | 0.982 | D | 0.661 | neutral | None | None | None | None | N |
D/L | 0.6146 | likely_pathogenic | 0.5954 | pathogenic | -0.052 | Destabilizing | 0.991 | D | 0.675 | prob.neutral | None | None | None | None | N |
D/M | 0.7746 | likely_pathogenic | 0.7629 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/N | 0.1515 | likely_benign | 0.1441 | benign | -0.307 | Destabilizing | 0.988 | D | 0.732 | prob.delet. | N | 0.423376485 | None | None | N |
D/P | 0.5898 | likely_pathogenic | 0.6027 | pathogenic | -0.219 | Destabilizing | 0.995 | D | 0.66 | neutral | None | None | None | None | N |
D/Q | 0.4847 | ambiguous | 0.4861 | ambiguous | -0.29 | Destabilizing | 0.982 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/R | 0.6224 | likely_pathogenic | 0.5762 | pathogenic | 0.103 | Stabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | N |
D/S | 0.1609 | likely_benign | 0.1646 | benign | -0.445 | Destabilizing | 0.968 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/T | 0.3605 | ambiguous | 0.3642 | ambiguous | -0.271 | Destabilizing | 0.991 | D | 0.668 | neutral | None | None | None | None | N |
D/V | 0.3607 | ambiguous | 0.3366 | benign | -0.219 | Destabilizing | 0.994 | D | 0.686 | prob.neutral | N | 0.460356005 | None | None | N |
D/W | 0.9465 | likely_pathogenic | 0.9308 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/Y | 0.3989 | ambiguous | 0.3542 | ambiguous | -0.365 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.490158837 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.