Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23894 | 71905;71906;71907 | chr2:178574452;178574451;178574450 | chr2:179439179;179439178;179439177 |
N2AB | 22253 | 66982;66983;66984 | chr2:178574452;178574451;178574450 | chr2:179439179;179439178;179439177 |
N2A | 21326 | 64201;64202;64203 | chr2:178574452;178574451;178574450 | chr2:179439179;179439178;179439177 |
N2B | 14829 | 44710;44711;44712 | chr2:178574452;178574451;178574450 | chr2:179439179;179439178;179439177 |
Novex-1 | 14954 | 45085;45086;45087 | chr2:178574452;178574451;178574450 | chr2:179439179;179439178;179439177 |
Novex-2 | 15021 | 45286;45287;45288 | chr2:178574452;178574451;178574450 | chr2:179439179;179439178;179439177 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 1.0 | D | 0.823 | 0.711 | 0.878826326238 | gnomAD-4.0.0 | 6.84289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09607E-06 | 0 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5876 | likely_pathogenic | 0.5602 | ambiguous | -0.471 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.494648643 | None | None | N |
G/C | 0.6811 | likely_pathogenic | 0.6524 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.557737274 | None | None | N |
G/D | 0.812 | likely_pathogenic | 0.7753 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.493305517 | None | None | N |
G/E | 0.8577 | likely_pathogenic | 0.8191 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/F | 0.9573 | likely_pathogenic | 0.9489 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
G/H | 0.8442 | likely_pathogenic | 0.8379 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/I | 0.9572 | likely_pathogenic | 0.9435 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/K | 0.8951 | likely_pathogenic | 0.878 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/L | 0.9326 | likely_pathogenic | 0.9223 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
G/M | 0.9231 | likely_pathogenic | 0.9162 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/N | 0.6299 | likely_pathogenic | 0.6294 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/P | 0.9968 | likely_pathogenic | 0.9962 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
G/Q | 0.8088 | likely_pathogenic | 0.7973 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
G/R | 0.7798 | likely_pathogenic | 0.75 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.52997178 | None | None | N |
G/S | 0.2976 | likely_benign | 0.3031 | benign | -0.865 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.502522228 | None | None | N |
G/T | 0.7435 | likely_pathogenic | 0.7276 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
G/V | 0.9161 | likely_pathogenic | 0.8906 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.545873989 | None | None | N |
G/W | 0.9169 | likely_pathogenic | 0.8966 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
G/Y | 0.8983 | likely_pathogenic | 0.8867 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.