Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23899 | 71920;71921;71922 | chr2:178574437;178574436;178574435 | chr2:179439164;179439163;179439162 |
N2AB | 22258 | 66997;66998;66999 | chr2:178574437;178574436;178574435 | chr2:179439164;179439163;179439162 |
N2A | 21331 | 64216;64217;64218 | chr2:178574437;178574436;178574435 | chr2:179439164;179439163;179439162 |
N2B | 14834 | 44725;44726;44727 | chr2:178574437;178574436;178574435 | chr2:179439164;179439163;179439162 |
Novex-1 | 14959 | 45100;45101;45102 | chr2:178574437;178574436;178574435 | chr2:179439164;179439163;179439162 |
Novex-2 | 15026 | 45301;45302;45303 | chr2:178574437;178574436;178574435 | chr2:179439164;179439163;179439162 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.98 | N | 0.711 | 0.424 | 0.624499334446 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9958 | likely_pathogenic | 0.9922 | pathogenic | -3.232 | Highly Destabilizing | 0.993 | D | 0.808 | deleterious | None | None | None | None | N |
F/C | 0.9185 | likely_pathogenic | 0.871 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.552569032 | None | None | N |
F/D | 0.9984 | likely_pathogenic | 0.9975 | pathogenic | -3.859 | Highly Destabilizing | 0.998 | D | 0.85 | deleterious | None | None | None | None | N |
F/E | 0.9989 | likely_pathogenic | 0.9982 | pathogenic | -3.633 | Highly Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
F/G | 0.9969 | likely_pathogenic | 0.9939 | pathogenic | -3.667 | Highly Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
F/H | 0.8525 | likely_pathogenic | 0.8397 | pathogenic | -2.326 | Highly Destabilizing | 0.323 | N | 0.639 | neutral | None | None | None | None | N |
F/I | 0.9384 | likely_pathogenic | 0.9056 | pathogenic | -1.777 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | N | 0.50189621 | None | None | N |
F/K | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -2.455 | Highly Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
F/L | 0.9926 | likely_pathogenic | 0.9886 | pathogenic | -1.777 | Destabilizing | 0.98 | D | 0.711 | prob.delet. | N | 0.504809499 | None | None | N |
F/M | 0.957 | likely_pathogenic | 0.9397 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
F/N | 0.9836 | likely_pathogenic | 0.9767 | pathogenic | -3.062 | Highly Destabilizing | 0.996 | D | 0.85 | deleterious | None | None | None | None | N |
F/P | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -2.279 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
F/Q | 0.9964 | likely_pathogenic | 0.9945 | pathogenic | -2.973 | Highly Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
F/R | 0.9978 | likely_pathogenic | 0.9964 | pathogenic | -2.007 | Highly Destabilizing | 0.996 | D | 0.851 | deleterious | None | None | None | None | N |
F/S | 0.9908 | likely_pathogenic | 0.9828 | pathogenic | -3.547 | Highly Destabilizing | 0.997 | D | 0.821 | deleterious | D | 0.564089922 | None | None | N |
F/T | 0.9952 | likely_pathogenic | 0.9915 | pathogenic | -3.213 | Highly Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
F/V | 0.947 | likely_pathogenic | 0.9159 | pathogenic | -2.279 | Highly Destabilizing | 0.98 | D | 0.775 | deleterious | N | 0.497106362 | None | None | N |
F/W | 0.7263 | likely_pathogenic | 0.695 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
F/Y | 0.2211 | likely_benign | 0.2213 | benign | -1.253 | Destabilizing | 0.4 | N | 0.263 | neutral | N | 0.497153404 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.