Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2390 | 7393;7394;7395 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
N2AB | 2390 | 7393;7394;7395 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
N2A | 2390 | 7393;7394;7395 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
N2B | 2344 | 7255;7256;7257 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
Novex-1 | 2344 | 7255;7256;7257 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
Novex-2 | 2344 | 7255;7256;7257 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
Novex-3 | 2390 | 7393;7394;7395 | chr2:178774000;178773999;178773998 | chr2:179638727;179638726;179638725 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs777470064 | -0.542 | 0.999 | D | 0.584 | 0.606 | 0.49741755877 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs777470064 | -0.542 | 0.999 | D | 0.584 | 0.606 | 0.49741755877 | gnomAD-4.0.0 | 3.1811E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9184 | likely_pathogenic | 0.9223 | pathogenic | -0.896 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/C | 0.8904 | likely_pathogenic | 0.8955 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/D | 0.9888 | likely_pathogenic | 0.9899 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
K/E | 0.7993 | likely_pathogenic | 0.808 | pathogenic | -0.316 | Destabilizing | 0.999 | D | 0.565 | neutral | D | 0.725171141 | None | None | N |
K/F | 0.9563 | likely_pathogenic | 0.9574 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
K/G | 0.9663 | likely_pathogenic | 0.9687 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
K/H | 0.5752 | likely_pathogenic | 0.6216 | pathogenic | -1.709 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
K/I | 0.7894 | likely_pathogenic | 0.7924 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.843 | deleterious | D | 0.726308531 | None | None | N |
K/L | 0.7435 | likely_pathogenic | 0.7404 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
K/M | 0.605 | likely_pathogenic | 0.6084 | pathogenic | 0.049 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
K/N | 0.9361 | likely_pathogenic | 0.9412 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | D | 0.725171141 | None | None | N |
K/P | 0.9967 | likely_pathogenic | 0.9972 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/Q | 0.4487 | ambiguous | 0.4644 | ambiguous | -0.821 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | D | 0.72658023 | None | None | N |
K/R | 0.1011 | likely_benign | 0.1002 | benign | -0.709 | Destabilizing | 0.999 | D | 0.584 | neutral | D | 0.541736171 | None | None | N |
K/S | 0.9585 | likely_pathogenic | 0.9618 | pathogenic | -1.428 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
K/T | 0.8966 | likely_pathogenic | 0.9061 | pathogenic | -1.09 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.72539425 | None | None | N |
K/V | 0.7771 | likely_pathogenic | 0.7779 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/W | 0.9331 | likely_pathogenic | 0.9355 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
K/Y | 0.8715 | likely_pathogenic | 0.875 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.