Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23904 | 71935;71936;71937 | chr2:178574422;178574421;178574420 | chr2:179439149;179439148;179439147 |
N2AB | 22263 | 67012;67013;67014 | chr2:178574422;178574421;178574420 | chr2:179439149;179439148;179439147 |
N2A | 21336 | 64231;64232;64233 | chr2:178574422;178574421;178574420 | chr2:179439149;179439148;179439147 |
N2B | 14839 | 44740;44741;44742 | chr2:178574422;178574421;178574420 | chr2:179439149;179439148;179439147 |
Novex-1 | 14964 | 45115;45116;45117 | chr2:178574422;178574421;178574420 | chr2:179439149;179439148;179439147 |
Novex-2 | 15031 | 45316;45317;45318 | chr2:178574422;178574421;178574420 | chr2:179439149;179439148;179439147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs267599038 | None | 0.944 | N | 0.416 | 0.289 | 0.252162846088 | gnomAD-4.0.0 | 3.18367E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71866E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4234 | ambiguous | 0.4904 | ambiguous | -1.285 | Destabilizing | 0.892 | D | 0.505 | neutral | N | 0.471480462 | None | None | I |
E/C | 0.9 | likely_pathogenic | 0.9235 | pathogenic | -0.955 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
E/D | 0.7529 | likely_pathogenic | 0.7955 | pathogenic | -1.705 | Destabilizing | 0.981 | D | 0.411 | neutral | N | 0.50658979 | None | None | I |
E/F | 0.9271 | likely_pathogenic | 0.9377 | pathogenic | -1.155 | Destabilizing | 0.975 | D | 0.837 | deleterious | None | None | None | None | I |
E/G | 0.6188 | likely_pathogenic | 0.6756 | pathogenic | -1.671 | Destabilizing | 0.983 | D | 0.695 | prob.neutral | N | 0.500006424 | None | None | I |
E/H | 0.8318 | likely_pathogenic | 0.848 | pathogenic | -1.383 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
E/I | 0.4515 | ambiguous | 0.535 | ambiguous | -0.208 | Destabilizing | 0.95 | D | 0.763 | deleterious | None | None | None | None | I |
E/K | 0.388 | ambiguous | 0.4373 | ambiguous | -1.518 | Destabilizing | 0.944 | D | 0.416 | neutral | N | 0.469861074 | None | None | I |
E/L | 0.6959 | likely_pathogenic | 0.7497 | pathogenic | -0.208 | Destabilizing | 0.033 | N | 0.517 | neutral | None | None | None | None | I |
E/M | 0.5889 | likely_pathogenic | 0.6632 | pathogenic | 0.426 | Stabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | I |
E/N | 0.7743 | likely_pathogenic | 0.8272 | pathogenic | -1.765 | Destabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | I |
E/P | 0.9974 | likely_pathogenic | 0.998 | pathogenic | -0.549 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | I |
E/Q | 0.1994 | likely_benign | 0.2029 | benign | -1.532 | Destabilizing | 0.994 | D | 0.577 | neutral | N | 0.51613193 | None | None | I |
E/R | 0.5999 | likely_pathogenic | 0.6184 | pathogenic | -1.367 | Destabilizing | 0.987 | D | 0.637 | neutral | None | None | None | None | I |
E/S | 0.5615 | ambiguous | 0.6288 | pathogenic | -2.323 | Highly Destabilizing | 0.957 | D | 0.432 | neutral | None | None | None | None | I |
E/T | 0.5466 | ambiguous | 0.6277 | pathogenic | -1.978 | Destabilizing | 0.975 | D | 0.688 | prob.neutral | None | None | None | None | I |
E/V | 0.266 | likely_benign | 0.3245 | benign | -0.549 | Destabilizing | 0.805 | D | 0.617 | neutral | N | 0.456923337 | None | None | I |
E/W | 0.9826 | likely_pathogenic | 0.9831 | pathogenic | -1.229 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | I |
E/Y | 0.906 | likely_pathogenic | 0.9152 | pathogenic | -0.993 | Destabilizing | 0.987 | D | 0.821 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.