Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23907 | 71944;71945;71946 | chr2:178574413;178574412;178574411 | chr2:179439140;179439139;179439138 |
N2AB | 22266 | 67021;67022;67023 | chr2:178574413;178574412;178574411 | chr2:179439140;179439139;179439138 |
N2A | 21339 | 64240;64241;64242 | chr2:178574413;178574412;178574411 | chr2:179439140;179439139;179439138 |
N2B | 14842 | 44749;44750;44751 | chr2:178574413;178574412;178574411 | chr2:179439140;179439139;179439138 |
Novex-1 | 14967 | 45124;45125;45126 | chr2:178574413;178574412;178574411 | chr2:179439140;179439139;179439138 |
Novex-2 | 15034 | 45325;45326;45327 | chr2:178574413;178574412;178574411 | chr2:179439140;179439139;179439138 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1309139547 | -0.417 | 0.977 | N | 0.74 | 0.385 | 0.301455362545 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8164 | likely_pathogenic | 0.7933 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
A/D | 0.9805 | likely_pathogenic | 0.9799 | pathogenic | -0.903 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
A/E | 0.9569 | likely_pathogenic | 0.9539 | pathogenic | -1.064 | Destabilizing | 0.997 | D | 0.794 | deleterious | N | 0.498271678 | None | None | I |
A/F | 0.9011 | likely_pathogenic | 0.869 | pathogenic | -1.029 | Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | I |
A/G | 0.4224 | ambiguous | 0.4305 | ambiguous | -0.473 | Destabilizing | 0.989 | D | 0.639 | neutral | N | 0.491928575 | None | None | I |
A/H | 0.9738 | likely_pathogenic | 0.9646 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
A/I | 0.6557 | likely_pathogenic | 0.6662 | pathogenic | -0.497 | Destabilizing | 0.966 | D | 0.717 | prob.delet. | None | None | None | None | I |
A/K | 0.9829 | likely_pathogenic | 0.9791 | pathogenic | -0.858 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | I |
A/L | 0.6971 | likely_pathogenic | 0.6873 | pathogenic | -0.497 | Destabilizing | 0.966 | D | 0.579 | neutral | None | None | None | None | I |
A/M | 0.7523 | likely_pathogenic | 0.7335 | pathogenic | -0.479 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | I |
A/N | 0.9453 | likely_pathogenic | 0.937 | pathogenic | -0.515 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | I |
A/P | 0.9646 | likely_pathogenic | 0.9672 | pathogenic | -0.441 | Destabilizing | 0.999 | D | 0.798 | deleterious | N | 0.519164317 | None | None | I |
A/Q | 0.9394 | likely_pathogenic | 0.9248 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | I |
A/R | 0.9502 | likely_pathogenic | 0.9356 | pathogenic | -0.267 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | I |
A/S | 0.3252 | likely_benign | 0.3129 | benign | -0.667 | Destabilizing | 0.989 | D | 0.629 | neutral | N | 0.474700147 | None | None | I |
A/T | 0.5601 | ambiguous | 0.5866 | pathogenic | -0.759 | Destabilizing | 0.977 | D | 0.74 | deleterious | N | 0.513377419 | None | None | I |
A/V | 0.3008 | likely_benign | 0.2943 | benign | -0.441 | Destabilizing | 0.235 | N | 0.447 | neutral | N | 0.46787941 | None | None | I |
A/W | 0.9885 | likely_pathogenic | 0.9836 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
A/Y | 0.953 | likely_pathogenic | 0.9371 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.