Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23911 | 71956;71957;71958 | chr2:178574401;178574400;178574399 | chr2:179439128;179439127;179439126 |
N2AB | 22270 | 67033;67034;67035 | chr2:178574401;178574400;178574399 | chr2:179439128;179439127;179439126 |
N2A | 21343 | 64252;64253;64254 | chr2:178574401;178574400;178574399 | chr2:179439128;179439127;179439126 |
N2B | 14846 | 44761;44762;44763 | chr2:178574401;178574400;178574399 | chr2:179439128;179439127;179439126 |
Novex-1 | 14971 | 45136;45137;45138 | chr2:178574401;178574400;178574399 | chr2:179439128;179439127;179439126 |
Novex-2 | 15038 | 45337;45338;45339 | chr2:178574401;178574400;178574399 | chr2:179439128;179439127;179439126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs763131148 | 0.441 | 0.977 | N | 0.627 | 0.281 | 0.317667799068 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/E | rs763131148 | 0.441 | 0.977 | N | 0.627 | 0.281 | 0.317667799068 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
K/E | rs763131148 | 0.441 | 0.977 | N | 0.627 | 0.281 | 0.317667799068 | gnomAD-4.0.0 | 3.03697E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.98429E-05 | 0 | 3.20277E-05 |
K/Q | None | None | 0.993 | N | 0.726 | 0.306 | 0.229924730088 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | None | None | 0.993 | N | 0.726 | 0.306 | 0.229924730088 | gnomAD-4.0.0 | 6.57307E-06 | None | None | None | None | I | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs570788965 | 0.005 | 0.235 | N | 0.327 | 0.149 | 0.21737058555 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.86847E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs570788965 | 0.005 | 0.235 | N | 0.327 | 0.149 | 0.21737058555 | 1000 genomes | 3.99361E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 2E-03 | 0 | None | None | None | 0 | None |
K/R | rs570788965 | 0.005 | 0.235 | N | 0.327 | 0.149 | 0.21737058555 | gnomAD-4.0.0 | 3.84378E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.27979E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4793 | ambiguous | 0.5081 | ambiguous | 0.006 | Stabilizing | 0.983 | D | 0.664 | neutral | None | None | None | None | I |
K/C | 0.785 | likely_pathogenic | 0.7955 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
K/D | 0.7939 | likely_pathogenic | 0.8038 | pathogenic | 0.001 | Stabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | I |
K/E | 0.3999 | ambiguous | 0.429 | ambiguous | 0.013 | Stabilizing | 0.977 | D | 0.627 | neutral | N | 0.441980888 | None | None | I |
K/F | 0.8415 | likely_pathogenic | 0.8628 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
K/G | 0.6406 | likely_pathogenic | 0.6544 | pathogenic | -0.186 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/H | 0.4626 | ambiguous | 0.471 | ambiguous | -0.388 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/I | 0.4319 | ambiguous | 0.5025 | ambiguous | 0.431 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/L | 0.4312 | ambiguous | 0.479 | ambiguous | 0.431 | Stabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/M | 0.3706 | ambiguous | 0.412 | ambiguous | 0.098 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.481510549 | None | None | I |
K/N | 0.656 | likely_pathogenic | 0.6933 | pathogenic | 0.123 | Stabilizing | 0.993 | D | 0.727 | prob.delet. | N | 0.474420204 | None | None | I |
K/P | 0.5333 | ambiguous | 0.5582 | ambiguous | 0.316 | Stabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
K/Q | 0.2169 | likely_benign | 0.2296 | benign | -0.006 | Destabilizing | 0.993 | D | 0.726 | prob.delet. | N | 0.510899468 | None | None | I |
K/R | 0.1004 | likely_benign | 0.098 | benign | -0.065 | Destabilizing | 0.235 | N | 0.327 | neutral | N | 0.481000636 | None | None | I |
K/S | 0.5881 | likely_pathogenic | 0.6261 | pathogenic | -0.323 | Destabilizing | 0.983 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/T | 0.354 | ambiguous | 0.3984 | ambiguous | -0.163 | Destabilizing | 0.997 | D | 0.722 | prob.delet. | N | 0.469393775 | None | None | I |
K/V | 0.4143 | ambiguous | 0.4731 | ambiguous | 0.316 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/W | 0.8806 | likely_pathogenic | 0.8713 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
K/Y | 0.7403 | likely_pathogenic | 0.7458 | pathogenic | 0.095 | Stabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.