Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23920 | 71983;71984;71985 | chr2:178574374;178574373;178574372 | chr2:179439101;179439100;179439099 |
N2AB | 22279 | 67060;67061;67062 | chr2:178574374;178574373;178574372 | chr2:179439101;179439100;179439099 |
N2A | 21352 | 64279;64280;64281 | chr2:178574374;178574373;178574372 | chr2:179439101;179439100;179439099 |
N2B | 14855 | 44788;44789;44790 | chr2:178574374;178574373;178574372 | chr2:179439101;179439100;179439099 |
Novex-1 | 14980 | 45163;45164;45165 | chr2:178574374;178574373;178574372 | chr2:179439101;179439100;179439099 |
Novex-2 | 15047 | 45364;45365;45366 | chr2:178574374;178574373;178574372 | chr2:179439101;179439100;179439099 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | None | N | 0.441 | 0.153 | 0.474168873855 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1843 | likely_benign | 0.2333 | benign | -1.255 | Destabilizing | 0.007 | N | 0.424 | neutral | None | None | None | None | N |
L/C | 0.2851 | likely_benign | 0.3714 | ambiguous | -0.692 | Destabilizing | 0.747 | D | 0.363 | neutral | None | None | None | None | N |
L/D | 0.561 | ambiguous | 0.6255 | pathogenic | -0.745 | Destabilizing | 0.035 | N | 0.522 | neutral | None | None | None | None | N |
L/E | 0.3983 | ambiguous | 0.4311 | ambiguous | -0.774 | Destabilizing | 0.035 | N | 0.517 | neutral | None | None | None | None | N |
L/F | 0.0543 | likely_benign | 0.0708 | benign | -0.92 | Destabilizing | None | N | 0.073 | neutral | N | 0.489964049 | None | None | N |
L/G | 0.4315 | ambiguous | 0.5182 | ambiguous | -1.526 | Destabilizing | 0.018 | N | 0.457 | neutral | None | None | None | None | N |
L/H | 0.1921 | likely_benign | 0.22 | benign | -0.676 | Destabilizing | 0.112 | N | 0.412 | neutral | None | None | None | None | N |
L/I | 0.0759 | likely_benign | 0.0905 | benign | -0.608 | Destabilizing | 0.007 | N | 0.335 | neutral | None | None | None | None | N |
L/K | 0.3445 | ambiguous | 0.3527 | ambiguous | -0.838 | Destabilizing | 0.018 | N | 0.471 | neutral | None | None | None | None | N |
L/M | 0.1009 | likely_benign | 0.1181 | benign | -0.475 | Destabilizing | 0.162 | N | 0.412 | neutral | N | 0.494985867 | None | None | N |
L/N | 0.2813 | likely_benign | 0.3283 | benign | -0.636 | Destabilizing | 0.06 | N | 0.513 | neutral | None | None | None | None | N |
L/P | 0.1655 | likely_benign | 0.1828 | benign | -0.791 | Destabilizing | 0.204 | N | 0.455 | neutral | None | None | None | None | N |
L/Q | 0.1806 | likely_benign | 0.2021 | benign | -0.83 | Destabilizing | 0.112 | N | 0.49 | neutral | None | None | None | None | N |
L/R | 0.2364 | likely_benign | 0.2448 | benign | -0.21 | Destabilizing | 0.112 | N | 0.476 | neutral | None | None | None | None | N |
L/S | 0.2465 | likely_benign | 0.3243 | benign | -1.167 | Destabilizing | None | N | 0.441 | neutral | N | 0.505413504 | None | None | N |
L/T | 0.1697 | likely_benign | 0.2069 | benign | -1.082 | Destabilizing | 0.018 | N | 0.425 | neutral | None | None | None | None | N |
L/V | 0.0727 | likely_benign | 0.0864 | benign | -0.791 | Destabilizing | 0.006 | N | 0.373 | neutral | N | 0.455715402 | None | None | N |
L/W | 0.1535 | likely_benign | 0.1886 | benign | -0.975 | Destabilizing | 0.162 | N | 0.372 | neutral | N | 0.490545769 | None | None | N |
L/Y | 0.123 | likely_benign | 0.1574 | benign | -0.75 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.