Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23924 | 71995;71996;71997 | chr2:178574362;178574361;178574360 | chr2:179439089;179439088;179439087 |
N2AB | 22283 | 67072;67073;67074 | chr2:178574362;178574361;178574360 | chr2:179439089;179439088;179439087 |
N2A | 21356 | 64291;64292;64293 | chr2:178574362;178574361;178574360 | chr2:179439089;179439088;179439087 |
N2B | 14859 | 44800;44801;44802 | chr2:178574362;178574361;178574360 | chr2:179439089;179439088;179439087 |
Novex-1 | 14984 | 45175;45176;45177 | chr2:178574362;178574361;178574360 | chr2:179439089;179439088;179439087 |
Novex-2 | 15051 | 45376;45377;45378 | chr2:178574362;178574361;178574360 | chr2:179439089;179439088;179439087 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1283056884 | None | 1.0 | N | 0.736 | 0.513 | 0.468336420597 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1283056884 | None | 1.0 | N | 0.736 | 0.513 | 0.468336420597 | gnomAD-4.0.0 | 1.85937E-06 | None | None | None | None | I | None | 1.33543E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.6954E-06 | 0 | 0 |
P/S | None | None | 1.0 | N | 0.797 | 0.457 | 0.152612264143 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1334 | likely_benign | 0.1316 | benign | -0.452 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.494517063 | None | None | I |
P/C | 0.6627 | likely_pathogenic | 0.6445 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/D | 0.7294 | likely_pathogenic | 0.6948 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/E | 0.512 | ambiguous | 0.4748 | ambiguous | -0.237 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/F | 0.7292 | likely_pathogenic | 0.7051 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/G | 0.5941 | likely_pathogenic | 0.5783 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.73 | deleterious | None | None | None | None | I |
P/H | 0.3778 | ambiguous | 0.3579 | ambiguous | 0.027 | Stabilizing | 1.0 | D | 0.757 | deleterious | N | 0.514902723 | None | None | I |
P/I | 0.4888 | ambiguous | 0.4752 | ambiguous | -0.218 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/K | 0.4829 | ambiguous | 0.4501 | ambiguous | -0.373 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
P/L | 0.225 | likely_benign | 0.2255 | benign | -0.218 | Destabilizing | 1.0 | D | 0.736 | deleterious | N | 0.482235704 | None | None | I |
P/M | 0.4922 | ambiguous | 0.4687 | ambiguous | -0.469 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
P/N | 0.5805 | likely_pathogenic | 0.5566 | ambiguous | -0.2 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/Q | 0.2914 | likely_benign | 0.2837 | benign | -0.387 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
P/R | 0.2993 | likely_benign | 0.2838 | benign | 0.119 | Stabilizing | 1.0 | D | 0.747 | deleterious | N | 0.496291489 | None | None | I |
P/S | 0.2535 | likely_benign | 0.2501 | benign | -0.594 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.473160805 | None | None | I |
P/T | 0.2071 | likely_benign | 0.2047 | benign | -0.573 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.514142255 | None | None | I |
P/V | 0.334 | likely_benign | 0.3209 | benign | -0.263 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/W | 0.8928 | likely_pathogenic | 0.8676 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.733 | deleterious | None | None | None | None | I |
P/Y | 0.7145 | likely_pathogenic | 0.6771 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.