Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23927 | 72004;72005;72006 | chr2:178574353;178574352;178574351 | chr2:179439080;179439079;179439078 |
N2AB | 22286 | 67081;67082;67083 | chr2:178574353;178574352;178574351 | chr2:179439080;179439079;179439078 |
N2A | 21359 | 64300;64301;64302 | chr2:178574353;178574352;178574351 | chr2:179439080;179439079;179439078 |
N2B | 14862 | 44809;44810;44811 | chr2:178574353;178574352;178574351 | chr2:179439080;179439079;179439078 |
Novex-1 | 14987 | 45184;45185;45186 | chr2:178574353;178574352;178574351 | chr2:179439080;179439079;179439078 |
Novex-2 | 15054 | 45385;45386;45387 | chr2:178574353;178574352;178574351 | chr2:179439080;179439079;179439078 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.014 | N | 0.506 | 0.193 | 0.139678290688 | gnomAD-4.0.0 | 4.10568E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39721E-06 | 0 | 0 |
P/Q | None | None | 0.126 | N | 0.604 | 0.368 | 0.289098819767 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0796 | likely_benign | 0.092 | benign | -1.508 | Destabilizing | 0.014 | N | 0.506 | neutral | N | 0.489558617 | None | None | N |
P/C | 0.4789 | ambiguous | 0.5557 | ambiguous | -1.08 | Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
P/D | 0.8501 | likely_pathogenic | 0.8791 | pathogenic | -1.79 | Destabilizing | 0.956 | D | 0.788 | deleterious | None | None | None | None | N |
P/E | 0.5201 | ambiguous | 0.5797 | pathogenic | -1.839 | Destabilizing | 0.754 | D | 0.777 | deleterious | None | None | None | None | N |
P/F | 0.646 | likely_pathogenic | 0.7348 | pathogenic | -1.47 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
P/G | 0.5127 | ambiguous | 0.5832 | pathogenic | -1.762 | Destabilizing | 0.754 | D | 0.805 | deleterious | None | None | None | None | N |
P/H | 0.3244 | likely_benign | 0.3875 | ambiguous | -1.267 | Destabilizing | 0.994 | D | 0.813 | deleterious | None | None | None | None | N |
P/I | 0.3748 | ambiguous | 0.448 | ambiguous | -0.921 | Destabilizing | 0.956 | D | 0.851 | deleterious | None | None | None | None | N |
P/K | 0.3913 | ambiguous | 0.4358 | ambiguous | -1.172 | Destabilizing | 0.754 | D | 0.785 | deleterious | None | None | None | None | N |
P/L | 0.2027 | likely_benign | 0.2629 | benign | -0.921 | Destabilizing | 0.942 | D | 0.821 | deleterious | N | 0.514760226 | None | None | N |
P/M | 0.4322 | ambiguous | 0.5065 | ambiguous | -0.609 | Destabilizing | 0.994 | D | 0.814 | deleterious | None | None | None | None | N |
P/N | 0.638 | likely_pathogenic | 0.7025 | pathogenic | -0.981 | Destabilizing | 0.956 | D | 0.839 | deleterious | None | None | None | None | N |
P/Q | 0.2487 | likely_benign | 0.3043 | benign | -1.283 | Destabilizing | 0.126 | N | 0.604 | neutral | N | 0.510517037 | None | None | N |
P/R | 0.233 | likely_benign | 0.2824 | benign | -0.549 | Destabilizing | 0.89 | D | 0.841 | deleterious | N | 0.508884422 | None | None | N |
P/S | 0.1761 | likely_benign | 0.2166 | benign | -1.409 | Destabilizing | 0.698 | D | 0.775 | deleterious | N | 0.490678035 | None | None | N |
P/T | 0.1787 | likely_benign | 0.2225 | benign | -1.364 | Destabilizing | 0.942 | D | 0.797 | deleterious | N | 0.500428179 | None | None | N |
P/V | 0.2623 | likely_benign | 0.3114 | benign | -1.084 | Destabilizing | 0.915 | D | 0.817 | deleterious | None | None | None | None | N |
P/W | 0.863 | likely_pathogenic | 0.9023 | pathogenic | -1.593 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
P/Y | 0.6459 | likely_pathogenic | 0.7303 | pathogenic | -1.305 | Destabilizing | 0.978 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.