Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23930 | 72013;72014;72015 | chr2:178574344;178574343;178574342 | chr2:179439071;179439070;179439069 |
N2AB | 22289 | 67090;67091;67092 | chr2:178574344;178574343;178574342 | chr2:179439071;179439070;179439069 |
N2A | 21362 | 64309;64310;64311 | chr2:178574344;178574343;178574342 | chr2:179439071;179439070;179439069 |
N2B | 14865 | 44818;44819;44820 | chr2:178574344;178574343;178574342 | chr2:179439071;179439070;179439069 |
Novex-1 | 14990 | 45193;45194;45195 | chr2:178574344;178574343;178574342 | chr2:179439071;179439070;179439069 |
Novex-2 | 15057 | 45394;45395;45396 | chr2:178574344;178574343;178574342 | chr2:179439071;179439070;179439069 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs752648041 | 0.46 | 0.984 | N | 0.609 | 0.335 | 0.550503487074 | gnomAD-2.1.1 | 6.84E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.51074E-04 | 0 |
K/I | rs752648041 | 0.46 | 0.984 | N | 0.609 | 0.335 | 0.550503487074 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
K/I | rs752648041 | 0.46 | 0.984 | N | 0.609 | 0.335 | 0.550503487074 | gnomAD-4.0.0 | 4.9582E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64582E-04 | 6.61204E-05 | 0 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4621 | ambiguous | 0.5541 | ambiguous | -0.412 | Destabilizing | 0.919 | D | 0.497 | neutral | None | None | None | None | N |
K/C | 0.6992 | likely_pathogenic | 0.7484 | pathogenic | -0.402 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
K/D | 0.8195 | likely_pathogenic | 0.8789 | pathogenic | -0.203 | Destabilizing | 0.919 | D | 0.505 | neutral | None | None | None | None | N |
K/E | 0.2895 | likely_benign | 0.3654 | ambiguous | -0.141 | Destabilizing | 0.64 | D | 0.519 | neutral | N | 0.516844006 | None | None | N |
K/F | 0.8286 | likely_pathogenic | 0.8724 | pathogenic | -0.316 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
K/G | 0.6931 | likely_pathogenic | 0.7784 | pathogenic | -0.733 | Destabilizing | 0.959 | D | 0.518 | neutral | None | None | None | None | N |
K/H | 0.4232 | ambiguous | 0.4843 | ambiguous | -1.2 | Destabilizing | 0.988 | D | 0.546 | neutral | None | None | None | None | N |
K/I | 0.3892 | ambiguous | 0.4681 | ambiguous | 0.391 | Stabilizing | 0.984 | D | 0.609 | neutral | N | 0.466088866 | None | None | N |
K/L | 0.4288 | ambiguous | 0.4999 | ambiguous | 0.391 | Stabilizing | 0.919 | D | 0.518 | neutral | None | None | None | None | N |
K/M | 0.2518 | likely_benign | 0.307 | benign | 0.401 | Stabilizing | 0.996 | D | 0.537 | neutral | None | None | None | None | N |
K/N | 0.5615 | ambiguous | 0.6756 | pathogenic | -0.277 | Destabilizing | 0.896 | D | 0.481 | neutral | N | 0.493057495 | None | None | N |
K/P | 0.5889 | likely_pathogenic | 0.6384 | pathogenic | 0.154 | Stabilizing | 0.996 | D | 0.549 | neutral | None | None | None | None | N |
K/Q | 0.1555 | likely_benign | 0.1918 | benign | -0.456 | Destabilizing | 0.251 | N | 0.231 | neutral | N | 0.450043011 | None | None | N |
K/R | 0.0935 | likely_benign | 0.0992 | benign | -0.541 | Destabilizing | 0.011 | N | 0.095 | neutral | N | 0.436209709 | None | None | N |
K/S | 0.5551 | ambiguous | 0.6581 | pathogenic | -0.873 | Destabilizing | 0.919 | D | 0.469 | neutral | None | None | None | None | N |
K/T | 0.2213 | likely_benign | 0.2899 | benign | -0.627 | Destabilizing | 0.946 | D | 0.502 | neutral | N | 0.44454119 | None | None | N |
K/V | 0.3923 | ambiguous | 0.4641 | ambiguous | 0.154 | Stabilizing | 0.988 | D | 0.506 | neutral | None | None | None | None | N |
K/W | 0.8761 | likely_pathogenic | 0.9009 | pathogenic | -0.208 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.7183 | likely_pathogenic | 0.7709 | pathogenic | 0.103 | Stabilizing | 0.996 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.