Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23940 | 72043;72044;72045 | chr2:178574314;178574313;178574312 | chr2:179439041;179439040;179439039 |
N2AB | 22299 | 67120;67121;67122 | chr2:178574314;178574313;178574312 | chr2:179439041;179439040;179439039 |
N2A | 21372 | 64339;64340;64341 | chr2:178574314;178574313;178574312 | chr2:179439041;179439040;179439039 |
N2B | 14875 | 44848;44849;44850 | chr2:178574314;178574313;178574312 | chr2:179439041;179439040;179439039 |
Novex-1 | 15000 | 45223;45224;45225 | chr2:178574314;178574313;178574312 | chr2:179439041;179439040;179439039 |
Novex-2 | 15067 | 45424;45425;45426 | chr2:178574314;178574313;178574312 | chr2:179439041;179439040;179439039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1553610793 | None | 0.491 | N | 0.565 | 0.279 | 0.382761230579 | gnomAD-4.0.0 | 3.18354E-06 | None | None | None | None | N | None | 5.65867E-05 | 0 | None | 0 | 2.77932E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/R | None | None | 0.491 | D | 0.503 | 0.259 | 0.508046185061 | gnomAD-4.0.0 | 3.18354E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85896E-06 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.073 | likely_benign | 0.0713 | benign | -0.767 | Destabilizing | None | N | 0.084 | neutral | N | 0.465321894 | None | None | N |
T/C | 0.3634 | ambiguous | 0.3598 | ambiguous | -0.894 | Destabilizing | 0.901 | D | 0.583 | neutral | None | None | None | None | N |
T/D | 0.3984 | ambiguous | 0.429 | ambiguous | -1.569 | Destabilizing | 0.209 | N | 0.413 | neutral | None | None | None | None | N |
T/E | 0.299 | likely_benign | 0.3182 | benign | -1.513 | Destabilizing | 0.007 | N | 0.241 | neutral | None | None | None | None | N |
T/F | 0.2544 | likely_benign | 0.2579 | benign | -0.943 | Destabilizing | 0.901 | D | 0.607 | neutral | None | None | None | None | N |
T/G | 0.2326 | likely_benign | 0.2505 | benign | -1.039 | Destabilizing | 0.209 | N | 0.399 | neutral | None | None | None | None | N |
T/H | 0.2505 | likely_benign | 0.2542 | benign | -1.404 | Destabilizing | 0.965 | D | 0.601 | neutral | None | None | None | None | N |
T/I | 0.2617 | likely_benign | 0.2646 | benign | -0.119 | Destabilizing | 0.491 | N | 0.565 | neutral | N | 0.485362117 | None | None | N |
T/K | 0.3052 | likely_benign | 0.3176 | benign | -0.756 | Destabilizing | 0.285 | N | 0.414 | neutral | N | 0.516422718 | None | None | N |
T/L | 0.1269 | likely_benign | 0.124 | benign | -0.119 | Destabilizing | 0.209 | N | 0.417 | neutral | None | None | None | None | N |
T/M | 0.0886 | likely_benign | 0.0863 | benign | 0.146 | Stabilizing | 0.965 | D | 0.589 | neutral | None | None | None | None | N |
T/N | 0.1307 | likely_benign | 0.1396 | benign | -1.123 | Destabilizing | 0.561 | D | 0.411 | neutral | None | None | None | None | N |
T/P | 0.8785 | likely_pathogenic | 0.8882 | pathogenic | -0.304 | Destabilizing | 0.662 | D | 0.517 | neutral | N | 0.508074728 | None | None | N |
T/Q | 0.2311 | likely_benign | 0.2347 | benign | -1.309 | Destabilizing | 0.561 | D | 0.498 | neutral | None | None | None | None | N |
T/R | 0.2557 | likely_benign | 0.2534 | benign | -0.558 | Destabilizing | 0.491 | N | 0.503 | neutral | D | 0.523138047 | None | None | N |
T/S | 0.0813 | likely_benign | 0.0856 | benign | -1.213 | Destabilizing | 0.002 | N | 0.084 | neutral | N | 0.365824117 | None | None | N |
T/V | 0.1818 | likely_benign | 0.1802 | benign | -0.304 | Destabilizing | 0.209 | N | 0.369 | neutral | None | None | None | None | N |
T/W | 0.6256 | likely_pathogenic | 0.6351 | pathogenic | -1.001 | Destabilizing | 0.991 | D | 0.61 | neutral | None | None | None | None | N |
T/Y | 0.2841 | likely_benign | 0.2921 | benign | -0.638 | Destabilizing | 0.965 | D | 0.607 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.