Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23944 | 72055;72056;72057 | chr2:178574302;178574301;178574300 | chr2:179439029;179439028;179439027 |
N2AB | 22303 | 67132;67133;67134 | chr2:178574302;178574301;178574300 | chr2:179439029;179439028;179439027 |
N2A | 21376 | 64351;64352;64353 | chr2:178574302;178574301;178574300 | chr2:179439029;179439028;179439027 |
N2B | 14879 | 44860;44861;44862 | chr2:178574302;178574301;178574300 | chr2:179439029;179439028;179439027 |
Novex-1 | 15004 | 45235;45236;45237 | chr2:178574302;178574301;178574300 | chr2:179439029;179439028;179439027 |
Novex-2 | 15071 | 45436;45437;45438 | chr2:178574302;178574301;178574300 | chr2:179439029;179439028;179439027 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1449315408 | None | 0.005 | N | 0.186 | 0.078 | 0.132336055621 | gnomAD-4.0.0 | 3.42169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52564E-05 | None | 0 | 0 | 0 | 0 | 6.62734E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3233 | likely_benign | 0.3005 | benign | -0.878 | Destabilizing | 0.103 | N | 0.401 | neutral | None | None | None | None | N |
K/C | 0.5431 | ambiguous | 0.4963 | ambiguous | -0.803 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
K/D | 0.7583 | likely_pathogenic | 0.7324 | pathogenic | -0.549 | Destabilizing | 0.209 | N | 0.407 | neutral | None | None | None | None | N |
K/E | 0.2136 | likely_benign | 0.2082 | benign | -0.358 | Destabilizing | 0.166 | N | 0.339 | neutral | N | 0.442423605 | None | None | N |
K/F | 0.7333 | likely_pathogenic | 0.7122 | pathogenic | -0.183 | Destabilizing | 0.901 | D | 0.569 | neutral | None | None | None | None | N |
K/G | 0.4825 | ambiguous | 0.4566 | ambiguous | -1.32 | Destabilizing | 0.209 | N | 0.49 | neutral | None | None | None | None | N |
K/H | 0.259 | likely_benign | 0.2424 | benign | -1.504 | Destabilizing | 0.901 | D | 0.541 | neutral | None | None | None | None | N |
K/I | 0.3202 | likely_benign | 0.3264 | benign | 0.319 | Stabilizing | 0.873 | D | 0.614 | neutral | N | 0.478616479 | None | None | N |
K/L | 0.3295 | likely_benign | 0.3352 | benign | 0.319 | Stabilizing | 0.561 | D | 0.519 | neutral | None | None | None | None | N |
K/M | 0.2 | likely_benign | 0.1973 | benign | 0.076 | Stabilizing | 0.901 | D | 0.54 | neutral | None | None | None | None | N |
K/N | 0.473 | ambiguous | 0.4565 | ambiguous | -0.961 | Destabilizing | 0.005 | N | 0.186 | neutral | N | 0.499682397 | None | None | N |
K/P | 0.9584 | likely_pathogenic | 0.9644 | pathogenic | -0.052 | Destabilizing | 0.722 | D | 0.494 | neutral | None | None | None | None | N |
K/Q | 0.0911 | likely_benign | 0.0893 | benign | -0.845 | Destabilizing | 0.005 | N | 0.204 | neutral | N | 0.4055988 | None | None | N |
K/R | 0.0773 | likely_benign | 0.0781 | benign | -0.857 | Destabilizing | 0.166 | N | 0.333 | neutral | N | 0.447714782 | None | None | N |
K/S | 0.3496 | ambiguous | 0.3186 | benign | -1.589 | Destabilizing | 0.007 | N | 0.211 | neutral | None | None | None | None | N |
K/T | 0.1596 | likely_benign | 0.1515 | benign | -1.169 | Destabilizing | 0.166 | N | 0.408 | neutral | N | 0.44881086 | None | None | N |
K/V | 0.3083 | likely_benign | 0.3097 | benign | -0.052 | Destabilizing | 0.561 | D | 0.531 | neutral | None | None | None | None | N |
K/W | 0.7422 | likely_pathogenic | 0.7238 | pathogenic | -0.114 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
K/Y | 0.5969 | likely_pathogenic | 0.5668 | pathogenic | 0.162 | Stabilizing | 0.965 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.