Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2395 | 7408;7409;7410 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
N2AB | 2395 | 7408;7409;7410 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
N2A | 2395 | 7408;7409;7410 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
N2B | 2349 | 7270;7271;7272 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
Novex-1 | 2349 | 7270;7271;7272 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
Novex-2 | 2349 | 7270;7271;7272 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
Novex-3 | 2395 | 7408;7409;7410 | chr2:178773985;178773984;178773983 | chr2:179638712;179638711;179638710 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.517 | N | 0.505 | 0.353 | 0.568143352941 | gnomAD-4.0.0 | 6.84081E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99311E-07 | 0 | 0 |
V/E | rs1193803834 | None | 0.983 | D | 0.659 | 0.633 | 0.85125097569 | gnomAD-4.0.0 | 2.73632E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7337E-04 | 0 | 3.47794E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5844 | likely_pathogenic | 0.6013 | pathogenic | -1.99 | Destabilizing | 0.517 | D | 0.505 | neutral | N | 0.516057993 | None | None | N |
V/C | 0.8419 | likely_pathogenic | 0.8482 | pathogenic | -1.344 | Destabilizing | 0.996 | D | 0.638 | neutral | None | None | None | None | N |
V/D | 0.9454 | likely_pathogenic | 0.9512 | pathogenic | -2.574 | Highly Destabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/E | 0.8675 | likely_pathogenic | 0.8764 | pathogenic | -2.399 | Highly Destabilizing | 0.983 | D | 0.659 | neutral | D | 0.584107626 | None | None | N |
V/F | 0.2978 | likely_benign | 0.2996 | benign | -1.33 | Destabilizing | 0.923 | D | 0.637 | neutral | None | None | None | None | N |
V/G | 0.7161 | likely_pathogenic | 0.7326 | pathogenic | -2.464 | Highly Destabilizing | 0.949 | D | 0.681 | prob.neutral | D | 0.584107626 | None | None | N |
V/H | 0.9399 | likely_pathogenic | 0.9446 | pathogenic | -2.148 | Highly Destabilizing | 0.996 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/I | 0.0664 | likely_benign | 0.065 | benign | -0.688 | Destabilizing | 0.005 | N | 0.162 | neutral | None | None | None | None | N |
V/K | 0.9112 | likely_pathogenic | 0.917 | pathogenic | -1.791 | Destabilizing | 0.961 | D | 0.651 | neutral | None | None | None | None | N |
V/L | 0.1812 | likely_benign | 0.1777 | benign | -0.688 | Destabilizing | 0.003 | N | 0.187 | neutral | N | 0.435617838 | None | None | N |
V/M | 0.2041 | likely_benign | 0.2016 | benign | -0.541 | Destabilizing | 0.901 | D | 0.597 | neutral | N | 0.516057993 | None | None | N |
V/N | 0.8672 | likely_pathogenic | 0.8776 | pathogenic | -1.963 | Destabilizing | 0.987 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/P | 0.9315 | likely_pathogenic | 0.9413 | pathogenic | -1.095 | Destabilizing | 0.987 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/Q | 0.8775 | likely_pathogenic | 0.8834 | pathogenic | -1.9 | Destabilizing | 0.987 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/R | 0.895 | likely_pathogenic | 0.8994 | pathogenic | -1.5 | Destabilizing | 0.961 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/S | 0.7955 | likely_pathogenic | 0.8104 | pathogenic | -2.499 | Highly Destabilizing | 0.961 | D | 0.622 | neutral | None | None | None | None | N |
V/T | 0.6688 | likely_pathogenic | 0.6808 | pathogenic | -2.189 | Highly Destabilizing | 0.775 | D | 0.513 | neutral | None | None | None | None | N |
V/W | 0.9195 | likely_pathogenic | 0.9224 | pathogenic | -1.786 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/Y | 0.781 | likely_pathogenic | 0.7872 | pathogenic | -1.399 | Destabilizing | 0.961 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.