Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23955 | 72088;72089;72090 | chr2:178574269;178574268;178574267 | chr2:179438996;179438995;179438994 |
N2AB | 22314 | 67165;67166;67167 | chr2:178574269;178574268;178574267 | chr2:179438996;179438995;179438994 |
N2A | 21387 | 64384;64385;64386 | chr2:178574269;178574268;178574267 | chr2:179438996;179438995;179438994 |
N2B | 14890 | 44893;44894;44895 | chr2:178574269;178574268;178574267 | chr2:179438996;179438995;179438994 |
Novex-1 | 15015 | 45268;45269;45270 | chr2:178574269;178574268;178574267 | chr2:179438996;179438995;179438994 |
Novex-2 | 15082 | 45469;45470;45471 | chr2:178574269;178574268;178574267 | chr2:179438996;179438995;179438994 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.961 | N | 0.635 | 0.146 | 0.136095386433 | gnomAD-4.0.0 | 6.84658E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00003E-07 | 0 | 0 |
K/Q | None | None | 0.994 | N | 0.633 | 0.255 | 0.180583059064 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3549 | ambiguous | 0.4074 | ambiguous | -0.207 | Destabilizing | 0.871 | D | 0.601 | neutral | None | None | None | None | N |
K/C | 0.7211 | likely_pathogenic | 0.7447 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/D | 0.6559 | likely_pathogenic | 0.7083 | pathogenic | 0.206 | Stabilizing | 0.97 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/E | 0.2581 | likely_benign | 0.3251 | benign | 0.246 | Stabilizing | 0.961 | D | 0.62 | neutral | N | 0.477042319 | None | None | N |
K/F | 0.8237 | likely_pathogenic | 0.8558 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
K/G | 0.5436 | ambiguous | 0.5967 | pathogenic | -0.463 | Destabilizing | 0.97 | D | 0.635 | neutral | None | None | None | None | N |
K/H | 0.3173 | likely_benign | 0.3347 | benign | -0.724 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
K/I | 0.3993 | ambiguous | 0.4397 | ambiguous | 0.403 | Stabilizing | 0.994 | D | 0.727 | prob.delet. | N | 0.465313673 | None | None | N |
K/L | 0.3937 | ambiguous | 0.4517 | ambiguous | 0.403 | Stabilizing | 0.985 | D | 0.654 | neutral | None | None | None | None | N |
K/M | 0.2851 | likely_benign | 0.3286 | benign | 0.212 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/N | 0.4848 | ambiguous | 0.5418 | ambiguous | 0.062 | Stabilizing | 0.961 | D | 0.635 | neutral | N | 0.449118294 | None | None | N |
K/P | 0.4037 | ambiguous | 0.456 | ambiguous | 0.229 | Stabilizing | 0.996 | D | 0.632 | neutral | None | None | None | None | N |
K/Q | 0.1327 | likely_benign | 0.1531 | benign | -0.079 | Destabilizing | 0.994 | D | 0.633 | neutral | N | 0.449625273 | None | None | N |
K/R | 0.0788 | likely_benign | 0.08 | benign | -0.156 | Destabilizing | 0.98 | D | 0.58 | neutral | N | 0.464691884 | None | None | N |
K/S | 0.4241 | ambiguous | 0.4946 | ambiguous | -0.525 | Destabilizing | 0.348 | N | 0.16 | neutral | None | None | None | None | N |
K/T | 0.2149 | likely_benign | 0.2569 | benign | -0.312 | Destabilizing | 0.925 | D | 0.672 | neutral | N | 0.492243845 | None | None | N |
K/V | 0.357 | ambiguous | 0.396 | ambiguous | 0.229 | Stabilizing | 0.996 | D | 0.597 | neutral | None | None | None | None | N |
K/W | 0.818 | likely_pathogenic | 0.8492 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/Y | 0.6902 | likely_pathogenic | 0.7233 | pathogenic | 0.133 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.