Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23956 | 72091;72092;72093 | chr2:178574266;178574265;178574264 | chr2:179438993;179438992;179438991 |
N2AB | 22315 | 67168;67169;67170 | chr2:178574266;178574265;178574264 | chr2:179438993;179438992;179438991 |
N2A | 21388 | 64387;64388;64389 | chr2:178574266;178574265;178574264 | chr2:179438993;179438992;179438991 |
N2B | 14891 | 44896;44897;44898 | chr2:178574266;178574265;178574264 | chr2:179438993;179438992;179438991 |
Novex-1 | 15016 | 45271;45272;45273 | chr2:178574266;178574265;178574264 | chr2:179438993;179438992;179438991 |
Novex-2 | 15083 | 45472;45473;45474 | chr2:178574266;178574265;178574264 | chr2:179438993;179438992;179438991 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs778594459 | -0.912 | 1.0 | D | 0.809 | 0.428 | 0.640559690875 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.91 | likely_pathogenic | 0.9288 | pathogenic | -2.378 | Highly Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
I/C | 0.9376 | likely_pathogenic | 0.9441 | pathogenic | -1.477 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
I/D | 0.9864 | likely_pathogenic | 0.9862 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
I/E | 0.9719 | likely_pathogenic | 0.9719 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/F | 0.7206 | likely_pathogenic | 0.7496 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.534411871 | None | None | N |
I/G | 0.9784 | likely_pathogenic | 0.9824 | pathogenic | -2.844 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/H | 0.9734 | likely_pathogenic | 0.9756 | pathogenic | -2.081 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
I/K | 0.9612 | likely_pathogenic | 0.9644 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
I/L | 0.2271 | likely_benign | 0.256 | benign | -1.082 | Destabilizing | 0.993 | D | 0.405 | neutral | N | 0.505883225 | None | None | N |
I/M | 0.2693 | likely_benign | 0.2968 | benign | -0.801 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.536946766 | None | None | N |
I/N | 0.7307 | likely_pathogenic | 0.7351 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.521666895 | None | None | N |
I/P | 0.8627 | likely_pathogenic | 0.8918 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/Q | 0.9617 | likely_pathogenic | 0.965 | pathogenic | -1.762 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/R | 0.9552 | likely_pathogenic | 0.9595 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
I/S | 0.9155 | likely_pathogenic | 0.9238 | pathogenic | -2.449 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.543783621 | None | None | N |
I/T | 0.8477 | likely_pathogenic | 0.8621 | pathogenic | -2.19 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.525679366 | None | None | N |
I/V | 0.1173 | likely_benign | 0.1332 | benign | -1.489 | Destabilizing | 0.993 | D | 0.382 | neutral | N | 0.487508108 | None | None | N |
I/W | 0.9892 | likely_pathogenic | 0.9899 | pathogenic | -1.784 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
I/Y | 0.9425 | likely_pathogenic | 0.9428 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.