Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23960 | 72103;72104;72105 | chr2:178574254;178574253;178574252 | chr2:179438981;179438980;179438979 |
N2AB | 22319 | 67180;67181;67182 | chr2:178574254;178574253;178574252 | chr2:179438981;179438980;179438979 |
N2A | 21392 | 64399;64400;64401 | chr2:178574254;178574253;178574252 | chr2:179438981;179438980;179438979 |
N2B | 14895 | 44908;44909;44910 | chr2:178574254;178574253;178574252 | chr2:179438981;179438980;179438979 |
Novex-1 | 15020 | 45283;45284;45285 | chr2:178574254;178574253;178574252 | chr2:179438981;179438980;179438979 |
Novex-2 | 15087 | 45484;45485;45486 | chr2:178574254;178574253;178574252 | chr2:179438981;179438980;179438979 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1366447660 | -0.921 | 0.006 | N | 0.457 | 0.19 | 0.225902525712 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
I/M | rs1366447660 | -0.921 | 0.006 | N | 0.457 | 0.19 | 0.225902525712 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs1366447660 | -0.921 | 0.006 | N | 0.457 | 0.19 | 0.225902525712 | gnomAD-4.0.0 | 3.10035E-06 | None | None | None | None | N | None | 1.33554E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39227E-06 | 0 | 0 |
I/T | rs568223521 | -2.237 | None | N | 0.369 | 0.119 | 0.612591404863 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.65426E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs568223521 | -2.237 | None | N | 0.369 | 0.119 | 0.612591404863 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs568223521 | -2.237 | None | N | 0.369 | 0.119 | 0.612591404863 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
I/T | rs568223521 | -2.237 | None | N | 0.369 | 0.119 | 0.612591404863 | gnomAD-4.0.0 | 2.62771E-05 | None | None | None | None | N | None | 9.62186E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1198927435 | None | None | N | 0.231 | 0.052 | 0.27855597813 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1198927435 | None | None | N | 0.231 | 0.052 | 0.27855597813 | gnomAD-4.0.0 | 2.02992E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.4099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.192 | likely_benign | 0.2494 | benign | -2.211 | Highly Destabilizing | 0.007 | N | 0.534 | neutral | None | None | None | None | N |
I/C | 0.5789 | likely_pathogenic | 0.6634 | pathogenic | -1.413 | Destabilizing | 0.356 | N | 0.649 | neutral | None | None | None | None | N |
I/D | 0.6673 | likely_pathogenic | 0.7152 | pathogenic | -2.12 | Highly Destabilizing | 0.072 | N | 0.627 | neutral | None | None | None | None | N |
I/E | 0.6014 | likely_pathogenic | 0.6488 | pathogenic | -2.027 | Highly Destabilizing | 0.016 | N | 0.597 | neutral | None | None | None | None | N |
I/F | 0.1423 | likely_benign | 0.1518 | benign | -1.415 | Destabilizing | 0.055 | N | 0.586 | neutral | N | 0.468797891 | None | None | N |
I/G | 0.5799 | likely_pathogenic | 0.6754 | pathogenic | -2.629 | Highly Destabilizing | 0.031 | N | 0.609 | neutral | None | None | None | None | N |
I/H | 0.3898 | ambiguous | 0.4397 | ambiguous | -1.84 | Destabilizing | 0.356 | N | 0.659 | neutral | None | None | None | None | N |
I/K | 0.4866 | ambiguous | 0.545 | ambiguous | -1.702 | Destabilizing | 0.016 | N | 0.602 | neutral | None | None | None | None | N |
I/L | 0.0998 | likely_benign | 0.1168 | benign | -1.071 | Destabilizing | 0.002 | N | 0.443 | neutral | N | 0.514342418 | None | None | N |
I/M | 0.0725 | likely_benign | 0.087 | benign | -0.838 | Destabilizing | 0.006 | N | 0.457 | neutral | N | 0.48749803 | None | None | N |
I/N | 0.206 | likely_benign | 0.2172 | benign | -1.72 | Destabilizing | 0.055 | N | 0.625 | neutral | N | 0.51668929 | None | None | N |
I/P | 0.9641 | likely_pathogenic | 0.9711 | pathogenic | -1.425 | Destabilizing | 0.136 | N | 0.617 | neutral | None | None | None | None | N |
I/Q | 0.396 | ambiguous | 0.4625 | ambiguous | -1.808 | Destabilizing | 0.003 | N | 0.541 | neutral | None | None | None | None | N |
I/R | 0.3762 | ambiguous | 0.4198 | ambiguous | -1.104 | Destabilizing | 0.072 | N | 0.617 | neutral | None | None | None | None | N |
I/S | 0.1723 | likely_benign | 0.1977 | benign | -2.371 | Highly Destabilizing | 0.012 | N | 0.599 | neutral | N | 0.464603927 | None | None | N |
I/T | 0.0895 | likely_benign | 0.1008 | benign | -2.16 | Highly Destabilizing | None | N | 0.369 | neutral | N | 0.462548161 | None | None | N |
I/V | 0.0658 | likely_benign | 0.0703 | benign | -1.425 | Destabilizing | None | N | 0.231 | neutral | N | 0.443847757 | None | None | N |
I/W | 0.6852 | likely_pathogenic | 0.764 | pathogenic | -1.633 | Destabilizing | 0.864 | D | 0.671 | neutral | None | None | None | None | N |
I/Y | 0.4058 | ambiguous | 0.4215 | ambiguous | -1.396 | Destabilizing | 0.356 | N | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.