Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23963 | 72112;72113;72114 | chr2:178574245;178574244;178574243 | chr2:179438972;179438971;179438970 |
N2AB | 22322 | 67189;67190;67191 | chr2:178574245;178574244;178574243 | chr2:179438972;179438971;179438970 |
N2A | 21395 | 64408;64409;64410 | chr2:178574245;178574244;178574243 | chr2:179438972;179438971;179438970 |
N2B | 14898 | 44917;44918;44919 | chr2:178574245;178574244;178574243 | chr2:179438972;179438971;179438970 |
Novex-1 | 15023 | 45292;45293;45294 | chr2:178574245;178574244;178574243 | chr2:179438972;179438971;179438970 |
Novex-2 | 15090 | 45493;45494;45495 | chr2:178574245;178574244;178574243 | chr2:179438972;179438971;179438970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1475718239 | -2.207 | 0.822 | N | 0.688 | 0.286 | 0.216624796971 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1475718239 | -2.207 | 0.822 | N | 0.688 | 0.286 | 0.216624796971 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1475718239 | -2.207 | 0.822 | N | 0.688 | 0.286 | 0.216624796971 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.006 | N | 0.291 | 0.096 | 0.208000267992 | gnomAD-4.0.0 | 1.59279E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9343 | likely_pathogenic | 0.9416 | pathogenic | -1.499 | Destabilizing | 0.86 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/C | 0.8836 | likely_pathogenic | 0.8673 | pathogenic | -1.457 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
K/D | 0.992 | likely_pathogenic | 0.9929 | pathogenic | -2.118 | Highly Destabilizing | 0.978 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/E | 0.8642 | likely_pathogenic | 0.8877 | pathogenic | -1.779 | Destabilizing | 0.822 | D | 0.741 | deleterious | N | 0.514667639 | None | None | N |
K/F | 0.9632 | likely_pathogenic | 0.9624 | pathogenic | -0.726 | Destabilizing | 0.993 | D | 0.79 | deleterious | None | None | None | None | N |
K/G | 0.9438 | likely_pathogenic | 0.9533 | pathogenic | -2.003 | Highly Destabilizing | 0.86 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/H | 0.7182 | likely_pathogenic | 0.7116 | pathogenic | -1.704 | Destabilizing | 0.978 | D | 0.741 | deleterious | None | None | None | None | N |
K/I | 0.8764 | likely_pathogenic | 0.8863 | pathogenic | -0.048 | Destabilizing | 0.978 | D | 0.787 | deleterious | None | None | None | None | N |
K/L | 0.8186 | likely_pathogenic | 0.8404 | pathogenic | -0.048 | Destabilizing | 0.86 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/M | 0.6115 | likely_pathogenic | 0.6242 | pathogenic | -0.44 | Destabilizing | 0.997 | D | 0.73 | prob.delet. | N | 0.521559179 | None | None | N |
K/N | 0.9584 | likely_pathogenic | 0.9651 | pathogenic | -1.915 | Destabilizing | 0.822 | D | 0.688 | prob.neutral | N | 0.514667639 | None | None | N |
K/P | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -0.514 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/Q | 0.4549 | ambiguous | 0.4709 | ambiguous | -1.483 | Destabilizing | 0.822 | D | 0.718 | prob.delet. | N | 0.479446634 | None | None | N |
K/R | 0.1121 | likely_benign | 0.1129 | benign | -0.829 | Destabilizing | 0.006 | N | 0.291 | neutral | N | 0.443194396 | None | None | N |
K/S | 0.9479 | likely_pathogenic | 0.9556 | pathogenic | -2.428 | Highly Destabilizing | 0.86 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/T | 0.8386 | likely_pathogenic | 0.8507 | pathogenic | -1.816 | Destabilizing | 0.822 | D | 0.702 | prob.neutral | N | 0.482622958 | None | None | N |
K/V | 0.8372 | likely_pathogenic | 0.8448 | pathogenic | -0.514 | Destabilizing | 0.978 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/W | 0.9487 | likely_pathogenic | 0.9495 | pathogenic | -0.777 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
K/Y | 0.8469 | likely_pathogenic | 0.8432 | pathogenic | -0.432 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.