Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23974 | 72145;72146;72147 | chr2:178574212;178574211;178574210 | chr2:179438939;179438938;179438937 |
N2AB | 22333 | 67222;67223;67224 | chr2:178574212;178574211;178574210 | chr2:179438939;179438938;179438937 |
N2A | 21406 | 64441;64442;64443 | chr2:178574212;178574211;178574210 | chr2:179438939;179438938;179438937 |
N2B | 14909 | 44950;44951;44952 | chr2:178574212;178574211;178574210 | chr2:179438939;179438938;179438937 |
Novex-1 | 15034 | 45325;45326;45327 | chr2:178574212;178574211;178574210 | chr2:179438939;179438938;179438937 |
Novex-2 | 15101 | 45526;45527;45528 | chr2:178574212;178574211;178574210 | chr2:179438939;179438938;179438937 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs1344955826 | -1.164 | 1.0 | N | 0.515 | 0.368 | 0.266385636622 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5353 | ambiguous | 0.4919 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
A/D | 0.9588 | likely_pathogenic | 0.9521 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.493835954 | None | None | I |
A/E | 0.9308 | likely_pathogenic | 0.9263 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
A/F | 0.8702 | likely_pathogenic | 0.8764 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
A/G | 0.3032 | likely_benign | 0.3131 | benign | -0.929 | Destabilizing | 1.0 | D | 0.515 | neutral | N | 0.480099792 | None | None | I |
A/H | 0.9635 | likely_pathogenic | 0.9568 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
A/I | 0.6816 | likely_pathogenic | 0.681 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
A/K | 0.9872 | likely_pathogenic | 0.9846 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
A/L | 0.6341 | likely_pathogenic | 0.6402 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
A/M | 0.6542 | likely_pathogenic | 0.6647 | pathogenic | 0.275 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
A/N | 0.8756 | likely_pathogenic | 0.8648 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
A/P | 0.9699 | likely_pathogenic | 0.9682 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.805 | deleterious | N | 0.489316503 | None | None | I |
A/Q | 0.9267 | likely_pathogenic | 0.9106 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
A/R | 0.9732 | likely_pathogenic | 0.9673 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
A/S | 0.2156 | likely_benign | 0.1994 | benign | -1.121 | Destabilizing | 1.0 | D | 0.495 | neutral | N | 0.469135107 | None | None | I |
A/T | 0.2791 | likely_benign | 0.2732 | benign | -0.902 | Destabilizing | 1.0 | D | 0.639 | neutral | N | 0.473414294 | None | None | I |
A/V | 0.3233 | likely_benign | 0.3235 | benign | 0.111 | Stabilizing | 1.0 | D | 0.545 | neutral | N | 0.467438614 | None | None | I |
A/W | 0.9857 | likely_pathogenic | 0.9837 | pathogenic | -1.069 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
A/Y | 0.9253 | likely_pathogenic | 0.9222 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.