Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23981 | 72166;72167;72168 | chr2:178574191;178574190;178574189 | chr2:179438918;179438917;179438916 |
N2AB | 22340 | 67243;67244;67245 | chr2:178574191;178574190;178574189 | chr2:179438918;179438917;179438916 |
N2A | 21413 | 64462;64463;64464 | chr2:178574191;178574190;178574189 | chr2:179438918;179438917;179438916 |
N2B | 14916 | 44971;44972;44973 | chr2:178574191;178574190;178574189 | chr2:179438918;179438917;179438916 |
Novex-1 | 15041 | 45346;45347;45348 | chr2:178574191;178574190;178574189 | chr2:179438918;179438917;179438916 |
Novex-2 | 15108 | 45547;45548;45549 | chr2:178574191;178574190;178574189 | chr2:179438918;179438917;179438916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1559434457 | None | 0.999 | N | 0.445 | 0.191 | 0.222439326576 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/D | rs1559434457 | None | 0.999 | N | 0.445 | 0.191 | 0.222439326576 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85923E-06 | 0 | 0 |
E/Q | rs794729246 | None | 1.0 | N | 0.598 | 0.24 | 0.290590437066 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs794729246 | None | 1.0 | N | 0.598 | 0.24 | 0.290590437066 | gnomAD-4.0.0 | 6.57436E-06 | None | None | None | None | I | None | 0 | 6.55394E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2655 | likely_benign | 0.2859 | benign | -0.341 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.50626444 | None | None | I |
E/C | 0.9055 | likely_pathogenic | 0.914 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/D | 0.1232 | likely_benign | 0.1236 | benign | -0.476 | Destabilizing | 0.999 | D | 0.445 | neutral | N | 0.429249238 | None | None | I |
E/F | 0.9032 | likely_pathogenic | 0.9197 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
E/G | 0.1843 | likely_benign | 0.2097 | benign | -0.587 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.509056816 | None | None | I |
E/H | 0.6344 | likely_pathogenic | 0.6638 | pathogenic | 0.43 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
E/I | 0.6482 | likely_pathogenic | 0.6812 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/K | 0.2873 | likely_benign | 0.3154 | benign | 0.041 | Stabilizing | 0.999 | D | 0.585 | neutral | N | 0.511902333 | None | None | I |
E/L | 0.6394 | likely_pathogenic | 0.6858 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
E/M | 0.6928 | likely_pathogenic | 0.7329 | pathogenic | 0.158 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
E/N | 0.3167 | likely_benign | 0.3355 | benign | -0.428 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
E/P | 0.849 | likely_pathogenic | 0.871 | pathogenic | 0.1 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/Q | 0.2039 | likely_benign | 0.2183 | benign | -0.334 | Destabilizing | 1.0 | D | 0.598 | neutral | N | 0.505515078 | None | None | I |
E/R | 0.4384 | ambiguous | 0.4679 | ambiguous | 0.452 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
E/S | 0.2922 | likely_benign | 0.3177 | benign | -0.611 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
E/T | 0.3449 | ambiguous | 0.3661 | ambiguous | -0.401 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/V | 0.4218 | ambiguous | 0.4477 | ambiguous | 0.1 | Stabilizing | 1.0 | D | 0.65 | neutral | N | 0.518060301 | None | None | I |
E/W | 0.9502 | likely_pathogenic | 0.9583 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
E/Y | 0.7984 | likely_pathogenic | 0.8256 | pathogenic | 0.322 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.