Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23988 | 72187;72188;72189 | chr2:178574170;178574169;178574168 | chr2:179438897;179438896;179438895 |
N2AB | 22347 | 67264;67265;67266 | chr2:178574170;178574169;178574168 | chr2:179438897;179438896;179438895 |
N2A | 21420 | 64483;64484;64485 | chr2:178574170;178574169;178574168 | chr2:179438897;179438896;179438895 |
N2B | 14923 | 44992;44993;44994 | chr2:178574170;178574169;178574168 | chr2:179438897;179438896;179438895 |
Novex-1 | 15048 | 45367;45368;45369 | chr2:178574170;178574169;178574168 | chr2:179438897;179438896;179438895 |
Novex-2 | 15115 | 45568;45569;45570 | chr2:178574170;178574169;178574168 | chr2:179438897;179438896;179438895 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1320505610 | None | 1.0 | N | 0.743 | 0.525 | 0.177238962908 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs1320505610 | None | 1.0 | N | 0.743 | 0.525 | 0.177238962908 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | N | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3048 | likely_benign | 0.3339 | benign | -0.187 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.476944056 | None | None | N |
G/C | 0.5036 | ambiguous | 0.529 | ambiguous | -0.804 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.522560315 | None | None | N |
G/D | 0.6396 | likely_pathogenic | 0.6573 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.478298687 | None | None | N |
G/E | 0.6867 | likely_pathogenic | 0.7165 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
G/F | 0.8737 | likely_pathogenic | 0.9 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
G/H | 0.7897 | likely_pathogenic | 0.8096 | pathogenic | -0.418 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
G/I | 0.7614 | likely_pathogenic | 0.802 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/K | 0.8993 | likely_pathogenic | 0.9203 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
G/L | 0.7894 | likely_pathogenic | 0.8291 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/M | 0.8091 | likely_pathogenic | 0.8367 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/N | 0.5318 | ambiguous | 0.5385 | ambiguous | -0.31 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
G/P | 0.9731 | likely_pathogenic | 0.9743 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/Q | 0.7395 | likely_pathogenic | 0.7703 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/R | 0.781 | likely_pathogenic | 0.8303 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.474791236 | None | None | N |
G/S | 0.1733 | likely_benign | 0.1927 | benign | -0.483 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.477727297 | None | None | N |
G/T | 0.4626 | ambiguous | 0.4847 | ambiguous | -0.561 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
G/V | 0.6222 | likely_pathogenic | 0.6716 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.533916621 | None | None | N |
G/W | 0.8208 | likely_pathogenic | 0.8492 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/Y | 0.8182 | likely_pathogenic | 0.8409 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.