Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23991 | 72196;72197;72198 | chr2:178574161;178574160;178574159 | chr2:179438888;179438887;179438886 |
N2AB | 22350 | 67273;67274;67275 | chr2:178574161;178574160;178574159 | chr2:179438888;179438887;179438886 |
N2A | 21423 | 64492;64493;64494 | chr2:178574161;178574160;178574159 | chr2:179438888;179438887;179438886 |
N2B | 14926 | 45001;45002;45003 | chr2:178574161;178574160;178574159 | chr2:179438888;179438887;179438886 |
Novex-1 | 15051 | 45376;45377;45378 | chr2:178574161;178574160;178574159 | chr2:179438888;179438887;179438886 |
Novex-2 | 15118 | 45577;45578;45579 | chr2:178574161;178574160;178574159 | chr2:179438888;179438887;179438886 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.646 | 0.602 | 0.516381326315 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8591E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.28 | likely_benign | 0.3232 | benign | -0.504 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.477823565 | None | None | N |
E/C | 0.9792 | likely_pathogenic | 0.9794 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/D | 0.6387 | likely_pathogenic | 0.6609 | pathogenic | -0.644 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.484005764 | None | None | N |
E/F | 0.9799 | likely_pathogenic | 0.9833 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/G | 0.4366 | ambiguous | 0.4931 | ambiguous | -0.746 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.495615559 | None | None | N |
E/H | 0.9141 | likely_pathogenic | 0.9307 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
E/I | 0.7783 | likely_pathogenic | 0.8015 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/K | 0.3541 | ambiguous | 0.4272 | ambiguous | -0.26 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.485954321 | None | None | N |
E/L | 0.8551 | likely_pathogenic | 0.8827 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/M | 0.7931 | likely_pathogenic | 0.8222 | pathogenic | 0.442 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/N | 0.7849 | likely_pathogenic | 0.8136 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/P | 0.6821 | likely_pathogenic | 0.7251 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/Q | 0.2741 | likely_benign | 0.3099 | benign | -0.309 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.469255644 | None | None | N |
E/R | 0.5746 | likely_pathogenic | 0.6394 | pathogenic | -0.099 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/S | 0.5359 | ambiguous | 0.586 | pathogenic | -0.587 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/T | 0.5941 | likely_pathogenic | 0.6401 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/V | 0.5414 | ambiguous | 0.576 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.648 | neutral | N | 0.498324584 | None | None | N |
E/W | 0.9947 | likely_pathogenic | 0.9956 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/Y | 0.9685 | likely_pathogenic | 0.9732 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.