Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23993 | 72202;72203;72204 | chr2:178574155;178574154;178574153 | chr2:179438882;179438881;179438880 |
N2AB | 22352 | 67279;67280;67281 | chr2:178574155;178574154;178574153 | chr2:179438882;179438881;179438880 |
N2A | 21425 | 64498;64499;64500 | chr2:178574155;178574154;178574153 | chr2:179438882;179438881;179438880 |
N2B | 14928 | 45007;45008;45009 | chr2:178574155;178574154;178574153 | chr2:179438882;179438881;179438880 |
Novex-1 | 15053 | 45382;45383;45384 | chr2:178574155;178574154;178574153 | chr2:179438882;179438881;179438880 |
Novex-2 | 15120 | 45583;45584;45585 | chr2:178574155;178574154;178574153 | chr2:179438882;179438881;179438880 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs2154171336 | None | 0.022 | N | 0.103 | 0.151 | 0.276898752692 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93648E-04 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs2154171336 | None | 0.022 | N | 0.103 | 0.151 | 0.276898752692 | gnomAD-4.0.0 | 6.56883E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94099E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4094 | ambiguous | 0.4035 | ambiguous | -0.927 | Destabilizing | 0.998 | D | 0.453 | neutral | None | None | None | None | N |
A/D | 0.3287 | likely_benign | 0.341 | ambiguous | -1.309 | Destabilizing | 0.669 | D | 0.429 | neutral | N | 0.489660192 | None | None | N |
A/E | 0.2807 | likely_benign | 0.2802 | benign | -1.388 | Destabilizing | 0.067 | N | 0.241 | neutral | None | None | None | None | N |
A/F | 0.362 | ambiguous | 0.387 | ambiguous | -1.294 | Destabilizing | 0.974 | D | 0.501 | neutral | None | None | None | None | N |
A/G | 0.1544 | likely_benign | 0.1594 | benign | -1.172 | Destabilizing | 0.801 | D | 0.349 | neutral | N | 0.446466775 | None | None | N |
A/H | 0.4817 | ambiguous | 0.4799 | ambiguous | -1.288 | Destabilizing | 0.974 | D | 0.477 | neutral | None | None | None | None | N |
A/I | 0.2698 | likely_benign | 0.2859 | benign | -0.592 | Destabilizing | 0.728 | D | 0.402 | neutral | None | None | None | None | N |
A/K | 0.4598 | ambiguous | 0.4609 | ambiguous | -1.189 | Destabilizing | 0.067 | N | 0.253 | neutral | None | None | None | None | N |
A/L | 0.1997 | likely_benign | 0.2065 | benign | -0.592 | Destabilizing | 0.525 | D | 0.385 | neutral | None | None | None | None | N |
A/M | 0.1866 | likely_benign | 0.1987 | benign | -0.38 | Destabilizing | 0.974 | D | 0.477 | neutral | None | None | None | None | N |
A/N | 0.2503 | likely_benign | 0.2623 | benign | -0.857 | Destabilizing | 0.949 | D | 0.489 | neutral | None | None | None | None | N |
A/P | 0.9411 | likely_pathogenic | 0.9508 | pathogenic | -0.679 | Destabilizing | 0.966 | D | 0.485 | neutral | N | 0.486309942 | None | None | N |
A/Q | 0.3228 | likely_benign | 0.3106 | benign | -1.112 | Destabilizing | 0.142 | N | 0.25 | neutral | None | None | None | None | N |
A/R | 0.4327 | ambiguous | 0.4363 | ambiguous | -0.727 | Destabilizing | 0.728 | D | 0.458 | neutral | None | None | None | None | N |
A/S | 0.0887 | likely_benign | 0.0914 | benign | -1.15 | Destabilizing | 0.801 | D | 0.372 | neutral | N | 0.425435355 | None | None | N |
A/T | 0.0807 | likely_benign | 0.0813 | benign | -1.146 | Destabilizing | 0.801 | D | 0.379 | neutral | N | 0.407420023 | None | None | N |
A/V | 0.1335 | likely_benign | 0.141 | benign | -0.679 | Destabilizing | 0.022 | N | 0.103 | neutral | N | 0.421184328 | None | None | N |
A/W | 0.8192 | likely_pathogenic | 0.829 | pathogenic | -1.544 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
A/Y | 0.4981 | ambiguous | 0.5075 | ambiguous | -1.18 | Destabilizing | 0.991 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.