Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24006 | 72241;72242;72243 | chr2:178574116;178574115;178574114 | chr2:179438843;179438842;179438841 |
N2AB | 22365 | 67318;67319;67320 | chr2:178574116;178574115;178574114 | chr2:179438843;179438842;179438841 |
N2A | 21438 | 64537;64538;64539 | chr2:178574116;178574115;178574114 | chr2:179438843;179438842;179438841 |
N2B | 14941 | 45046;45047;45048 | chr2:178574116;178574115;178574114 | chr2:179438843;179438842;179438841 |
Novex-1 | 15066 | 45421;45422;45423 | chr2:178574116;178574115;178574114 | chr2:179438843;179438842;179438841 |
Novex-2 | 15133 | 45622;45623;45624 | chr2:178574116;178574115;178574114 | chr2:179438843;179438842;179438841 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 1.0 | D | 0.741 | 0.722 | 0.482500522706 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
G/D | rs779849818 | -0.327 | 1.0 | D | 0.898 | 0.747 | 0.515317749148 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4646 | ambiguous | 0.5577 | ambiguous | -0.348 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.538352345 | None | None | I |
G/C | 0.629 | likely_pathogenic | 0.7029 | pathogenic | -0.896 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.565864349 | None | None | I |
G/D | 0.5728 | likely_pathogenic | 0.6654 | pathogenic | -0.734 | Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.526235571 | None | None | I |
G/E | 0.6614 | likely_pathogenic | 0.7591 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
G/F | 0.9118 | likely_pathogenic | 0.9448 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
G/H | 0.8171 | likely_pathogenic | 0.8644 | pathogenic | -0.559 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
G/I | 0.8941 | likely_pathogenic | 0.932 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | I |
G/K | 0.8687 | likely_pathogenic | 0.9119 | pathogenic | -0.957 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | I |
G/L | 0.8333 | likely_pathogenic | 0.8853 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/M | 0.8592 | likely_pathogenic | 0.9057 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/N | 0.5183 | ambiguous | 0.5878 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/P | 0.994 | likely_pathogenic | 0.9966 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
G/Q | 0.7176 | likely_pathogenic | 0.7743 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | I |
G/R | 0.7636 | likely_pathogenic | 0.8341 | pathogenic | -0.46 | Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.541466217 | None | None | I |
G/S | 0.254 | likely_benign | 0.3246 | benign | -0.735 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.5208932 | None | None | I |
G/T | 0.6524 | likely_pathogenic | 0.7354 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
G/V | 0.7934 | likely_pathogenic | 0.8633 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.536150299 | None | None | I |
G/W | 0.8682 | likely_pathogenic | 0.916 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/Y | 0.8358 | likely_pathogenic | 0.8855 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.