Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24010 | 72253;72254;72255 | chr2:178574104;178574103;178574102 | chr2:179438831;179438830;179438829 |
N2AB | 22369 | 67330;67331;67332 | chr2:178574104;178574103;178574102 | chr2:179438831;179438830;179438829 |
N2A | 21442 | 64549;64550;64551 | chr2:178574104;178574103;178574102 | chr2:179438831;179438830;179438829 |
N2B | 14945 | 45058;45059;45060 | chr2:178574104;178574103;178574102 | chr2:179438831;179438830;179438829 |
Novex-1 | 15070 | 45433;45434;45435 | chr2:178574104;178574103;178574102 | chr2:179438831;179438830;179438829 |
Novex-2 | 15137 | 45634;45635;45636 | chr2:178574104;178574103;178574102 | chr2:179438831;179438830;179438829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 0.003 | N | 0.215 | 0.116 | 0.255777322467 | gnomAD-4.0.0 | 6.84288E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65667E-05 |
P/T | None | None | 0.183 | N | 0.428 | 0.085 | 0.242825505644 | gnomAD-4.0.0 | 6.84281E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0623 | likely_benign | 0.0666 | benign | -1.245 | Destabilizing | None | N | 0.21 | neutral | N | 0.43513506 | None | None | N |
P/C | 0.3323 | likely_benign | 0.3695 | ambiguous | -0.84 | Destabilizing | 0.951 | D | 0.537 | neutral | None | None | None | None | N |
P/D | 0.3159 | likely_benign | 0.3382 | benign | -1.001 | Destabilizing | 0.228 | N | 0.437 | neutral | None | None | None | None | N |
P/E | 0.1479 | likely_benign | 0.1679 | benign | -1.064 | Destabilizing | 0.129 | N | 0.372 | neutral | None | None | None | None | N |
P/F | 0.2641 | likely_benign | 0.3173 | benign | -1.124 | Destabilizing | 0.836 | D | 0.58 | neutral | None | None | None | None | N |
P/G | 0.2227 | likely_benign | 0.2441 | benign | -1.482 | Destabilizing | 0.129 | N | 0.433 | neutral | None | None | None | None | N |
P/H | 0.115 | likely_benign | 0.1278 | benign | -0.954 | Destabilizing | 0.002 | N | 0.403 | neutral | None | None | None | None | N |
P/I | 0.1584 | likely_benign | 0.1797 | benign | -0.727 | Destabilizing | 0.418 | N | 0.642 | neutral | None | None | None | None | N |
P/K | 0.1271 | likely_benign | 0.1392 | benign | -1.044 | Destabilizing | None | N | 0.203 | neutral | None | None | None | None | N |
P/L | 0.0631 | likely_benign | 0.0726 | benign | -0.727 | Destabilizing | 0.101 | N | 0.439 | neutral | N | 0.474328167 | None | None | N |
P/M | 0.1616 | likely_benign | 0.1807 | benign | -0.52 | Destabilizing | 0.94 | D | 0.557 | neutral | None | None | None | None | N |
P/N | 0.1854 | likely_benign | 0.2025 | benign | -0.77 | Destabilizing | 0.418 | N | 0.513 | neutral | None | None | None | None | N |
P/Q | 0.0773 | likely_benign | 0.0892 | benign | -1.025 | Destabilizing | 0.003 | N | 0.215 | neutral | N | 0.473288017 | None | None | N |
P/R | 0.104 | likely_benign | 0.1188 | benign | -0.423 | Destabilizing | 0.101 | N | 0.443 | neutral | N | 0.452451385 | None | None | N |
P/S | 0.0857 | likely_benign | 0.095 | benign | -1.221 | Destabilizing | 0.101 | N | 0.414 | neutral | N | 0.501013336 | None | None | N |
P/T | 0.0837 | likely_benign | 0.0913 | benign | -1.185 | Destabilizing | 0.183 | N | 0.428 | neutral | N | 0.46949835 | None | None | N |
P/V | 0.1185 | likely_benign | 0.1305 | benign | -0.864 | Destabilizing | 0.129 | N | 0.442 | neutral | None | None | None | None | N |
P/W | 0.4529 | ambiguous | 0.5173 | ambiguous | -1.216 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
P/Y | 0.2497 | likely_benign | 0.2799 | benign | -0.957 | Destabilizing | 0.418 | N | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.