Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24013 | 72262;72263;72264 | chr2:178574095;178574094;178574093 | chr2:179438822;179438821;179438820 |
N2AB | 22372 | 67339;67340;67341 | chr2:178574095;178574094;178574093 | chr2:179438822;179438821;179438820 |
N2A | 21445 | 64558;64559;64560 | chr2:178574095;178574094;178574093 | chr2:179438822;179438821;179438820 |
N2B | 14948 | 45067;45068;45069 | chr2:178574095;178574094;178574093 | chr2:179438822;179438821;179438820 |
Novex-1 | 15073 | 45442;45443;45444 | chr2:178574095;178574094;178574093 | chr2:179438822;179438821;179438820 |
Novex-2 | 15140 | 45643;45644;45645 | chr2:178574095;178574094;178574093 | chr2:179438822;179438821;179438820 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs529670209 | -0.399 | 0.006 | N | 0.163 | 0.044 | 0.144782658237 | gnomAD-2.1.1 | 3.93E-05 | None | None | None | None | N | None | 0 | 3.11192E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs529670209 | -0.399 | 0.006 | N | 0.163 | 0.044 | 0.144782658237 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96541E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs529670209 | -0.399 | 0.006 | N | 0.163 | 0.044 | 0.144782658237 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/D | rs529670209 | -0.399 | 0.006 | N | 0.163 | 0.044 | 0.144782658237 | gnomAD-4.0.0 | 9.91653E-06 | None | None | None | None | N | None | 1.3334E-05 | 1.83333E-04 | None | 0 | 0 | None | 0 | 0 | 8.47772E-07 | 0 | 4.80184E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.131 | likely_benign | 0.1436 | benign | -0.424 | Destabilizing | 0.651 | D | 0.373 | neutral | N | 0.452578242 | None | None | N |
E/C | 0.8197 | likely_pathogenic | 0.8443 | pathogenic | -0.203 | Destabilizing | 0.995 | D | 0.585 | neutral | None | None | None | None | N |
E/D | 0.1272 | likely_benign | 0.1356 | benign | -0.393 | Destabilizing | 0.006 | N | 0.163 | neutral | N | 0.479912053 | None | None | N |
E/F | 0.6286 | likely_pathogenic | 0.6655 | pathogenic | -0.171 | Destabilizing | 0.982 | D | 0.526 | neutral | None | None | None | None | N |
E/G | 0.166 | likely_benign | 0.1815 | benign | -0.636 | Destabilizing | 0.651 | D | 0.382 | neutral | N | 0.476722885 | None | None | N |
E/H | 0.445 | ambiguous | 0.4803 | ambiguous | 0.137 | Stabilizing | 0.946 | D | 0.334 | neutral | None | None | None | None | N |
E/I | 0.2338 | likely_benign | 0.2501 | benign | 0.108 | Stabilizing | 0.946 | D | 0.562 | neutral | None | None | None | None | N |
E/K | 0.1128 | likely_benign | 0.1273 | benign | 0.218 | Stabilizing | 0.024 | N | 0.177 | neutral | N | 0.502135552 | None | None | N |
E/L | 0.257 | likely_benign | 0.2919 | benign | 0.108 | Stabilizing | 0.712 | D | 0.509 | neutral | None | None | None | None | N |
E/M | 0.3228 | likely_benign | 0.3552 | ambiguous | 0.133 | Stabilizing | 0.995 | D | 0.47 | neutral | None | None | None | None | N |
E/N | 0.2487 | likely_benign | 0.2737 | benign | -0.2 | Destabilizing | 0.553 | D | 0.373 | neutral | None | None | None | None | N |
E/P | 0.4009 | ambiguous | 0.382 | ambiguous | -0.049 | Destabilizing | 0.946 | D | 0.43 | neutral | None | None | None | None | N |
E/Q | 0.1233 | likely_benign | 0.1321 | benign | -0.142 | Destabilizing | 0.068 | N | 0.16 | neutral | N | 0.456060962 | None | None | N |
E/R | 0.2341 | likely_benign | 0.2547 | benign | 0.51 | Stabilizing | 0.553 | D | 0.335 | neutral | None | None | None | None | N |
E/S | 0.1942 | likely_benign | 0.2106 | benign | -0.356 | Destabilizing | 0.712 | D | 0.3 | neutral | None | None | None | None | N |
E/T | 0.2081 | likely_benign | 0.2278 | benign | -0.177 | Destabilizing | 0.834 | D | 0.402 | neutral | None | None | None | None | N |
E/V | 0.1499 | likely_benign | 0.161 | benign | -0.049 | Destabilizing | 0.93 | D | 0.468 | neutral | N | 0.473786824 | None | None | N |
E/W | 0.8773 | likely_pathogenic | 0.8943 | pathogenic | 0.02 | Stabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | N |
E/Y | 0.504 | ambiguous | 0.5456 | ambiguous | 0.078 | Stabilizing | 0.982 | D | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.