Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24021 | 72286;72287;72288 | chr2:178574071;178574070;178574069 | chr2:179438798;179438797;179438796 |
N2AB | 22380 | 67363;67364;67365 | chr2:178574071;178574070;178574069 | chr2:179438798;179438797;179438796 |
N2A | 21453 | 64582;64583;64584 | chr2:178574071;178574070;178574069 | chr2:179438798;179438797;179438796 |
N2B | 14956 | 45091;45092;45093 | chr2:178574071;178574070;178574069 | chr2:179438798;179438797;179438796 |
Novex-1 | 15081 | 45466;45467;45468 | chr2:178574071;178574070;178574069 | chr2:179438798;179438797;179438796 |
Novex-2 | 15148 | 45667;45668;45669 | chr2:178574071;178574070;178574069 | chr2:179438798;179438797;179438796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1709204833 | None | 0.991 | N | 0.496 | 0.199 | 0.104622674875 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86008E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5663 | likely_pathogenic | 0.616 | pathogenic | -0.26 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | N |
R/C | 0.2241 | likely_benign | 0.2688 | benign | -0.097 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
R/D | 0.8802 | likely_pathogenic | 0.8968 | pathogenic | 0.038 | Stabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
R/E | 0.5099 | ambiguous | 0.5653 | pathogenic | 0.121 | Stabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | N |
R/F | 0.6578 | likely_pathogenic | 0.7134 | pathogenic | -0.319 | Destabilizing | 0.995 | D | 0.849 | deleterious | None | None | None | None | N |
R/G | 0.4481 | ambiguous | 0.5101 | ambiguous | -0.516 | Destabilizing | 0.999 | D | 0.51 | neutral | N | 0.510250816 | None | None | N |
R/H | 0.1258 | likely_benign | 0.1393 | benign | -0.994 | Destabilizing | 1.0 | D | 0.537 | neutral | None | None | None | None | N |
R/I | 0.3221 | likely_benign | 0.3642 | ambiguous | 0.401 | Stabilizing | 0.99 | D | 0.587 | neutral | None | None | None | None | N |
R/K | 0.0836 | likely_benign | 0.0949 | benign | -0.204 | Destabilizing | 0.991 | D | 0.496 | neutral | N | 0.372435084 | None | None | N |
R/L | 0.3318 | likely_benign | 0.3633 | ambiguous | 0.401 | Stabilizing | 0.145 | N | 0.416 | neutral | None | None | None | None | N |
R/M | 0.3416 | ambiguous | 0.3963 | ambiguous | 0.116 | Stabilizing | 0.993 | D | 0.551 | neutral | N | 0.451093304 | None | None | N |
R/N | 0.7571 | likely_pathogenic | 0.7945 | pathogenic | 0.317 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
R/P | 0.952 | likely_pathogenic | 0.96 | pathogenic | 0.202 | Stabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
R/Q | 0.1169 | likely_benign | 0.1336 | benign | 0.115 | Stabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
R/S | 0.6521 | likely_pathogenic | 0.6979 | pathogenic | -0.246 | Destabilizing | 0.999 | D | 0.54 | neutral | N | 0.510250816 | None | None | N |
R/T | 0.3394 | likely_benign | 0.3867 | ambiguous | -0.008 | Destabilizing | 0.988 | D | 0.573 | neutral | N | 0.484565724 | None | None | N |
R/V | 0.4191 | ambiguous | 0.4647 | ambiguous | 0.202 | Stabilizing | 0.965 | D | 0.591 | neutral | None | None | None | None | N |
R/W | 0.2753 | likely_benign | 0.3242 | benign | -0.177 | Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.474223988 | None | None | N |
R/Y | 0.5652 | likely_pathogenic | 0.6275 | pathogenic | 0.186 | Stabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.