Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24036 | 72331;72332;72333 | chr2:178574026;178574025;178574024 | chr2:179438753;179438752;179438751 |
N2AB | 22395 | 67408;67409;67410 | chr2:178574026;178574025;178574024 | chr2:179438753;179438752;179438751 |
N2A | 21468 | 64627;64628;64629 | chr2:178574026;178574025;178574024 | chr2:179438753;179438752;179438751 |
N2B | 14971 | 45136;45137;45138 | chr2:178574026;178574025;178574024 | chr2:179438753;179438752;179438751 |
Novex-1 | 15096 | 45511;45512;45513 | chr2:178574026;178574025;178574024 | chr2:179438753;179438752;179438751 |
Novex-2 | 15163 | 45712;45713;45714 | chr2:178574026;178574025;178574024 | chr2:179438753;179438752;179438751 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs544263357 | -0.134 | 0.704 | N | 0.513 | 0.284 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 1.29316E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs544263357 | -0.134 | 0.704 | N | 0.513 | 0.284 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs544263357 | -0.134 | 0.704 | N | 0.513 | 0.284 | None | gnomAD-4.0.0 | 2.47933E-06 | None | None | None | None | I | None | 4.00555E-05 | 1.6675E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | None | -0.054 | 0.31 | D | 0.257 | 0.242 | 0.245660935333 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 6.47E-05 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | None | -0.054 | 0.31 | D | 0.257 | 0.242 | 0.245660935333 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | None | -0.054 | 0.31 | D | 0.257 | 0.242 | 0.245660935333 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
K/Q | None | -0.054 | 0.31 | D | 0.257 | 0.242 | 0.245660935333 | gnomAD-4.0.0 | 5.5781E-06 | None | None | None | None | I | None | 1.33301E-05 | 5.00083E-05 | None | 0 | 0 | None | 0 | 0 | 4.23869E-06 | 0 | 0 |
K/R | rs1709185924 | None | 0.92 | N | 0.465 | 0.153 | 0.391313282164 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3493 | ambiguous | 0.3669 | ambiguous | 0.034 | Stabilizing | 0.759 | D | 0.426 | neutral | None | None | None | None | I |
K/C | 0.7387 | likely_pathogenic | 0.7544 | pathogenic | -0.303 | Destabilizing | 0.999 | D | 0.427 | neutral | None | None | None | None | I |
K/D | 0.6532 | likely_pathogenic | 0.6677 | pathogenic | -0.17 | Destabilizing | 0.939 | D | 0.405 | neutral | None | None | None | None | I |
K/E | 0.1908 | likely_benign | 0.2142 | benign | -0.185 | Destabilizing | 0.704 | D | 0.513 | neutral | N | 0.495383803 | None | None | I |
K/F | 0.8185 | likely_pathogenic | 0.8324 | pathogenic | -0.303 | Destabilizing | 0.997 | D | 0.427 | neutral | None | None | None | None | I |
K/G | 0.4436 | ambiguous | 0.4574 | ambiguous | -0.103 | Destabilizing | 0.939 | D | 0.427 | neutral | None | None | None | None | I |
K/H | 0.3474 | ambiguous | 0.3583 | ambiguous | -0.277 | Destabilizing | 0.991 | D | 0.402 | neutral | None | None | None | None | I |
K/I | 0.408 | ambiguous | 0.4401 | ambiguous | 0.312 | Stabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | I |
K/L | 0.3964 | ambiguous | 0.4258 | ambiguous | 0.312 | Stabilizing | 0.969 | D | 0.427 | neutral | None | None | None | None | I |
K/M | 0.2678 | likely_benign | 0.2894 | benign | 0.049 | Stabilizing | 0.996 | D | 0.402 | neutral | N | 0.514932356 | None | None | I |
K/N | 0.5141 | ambiguous | 0.5452 | ambiguous | 0.149 | Stabilizing | 0.92 | D | 0.425 | neutral | D | 0.529651093 | None | None | I |
K/P | 0.7425 | likely_pathogenic | 0.7401 | pathogenic | 0.244 | Stabilizing | 0.991 | D | 0.385 | neutral | None | None | None | None | I |
K/Q | 0.1305 | likely_benign | 0.1412 | benign | -0.017 | Destabilizing | 0.31 | N | 0.257 | neutral | D | 0.52570671 | None | None | I |
K/R | 0.0748 | likely_benign | 0.0757 | benign | -0.044 | Destabilizing | 0.92 | D | 0.465 | neutral | N | 0.43092968 | None | None | I |
K/S | 0.4038 | ambiguous | 0.43 | ambiguous | -0.246 | Destabilizing | 0.2 | N | 0.24 | neutral | None | None | None | None | I |
K/T | 0.177 | likely_benign | 0.1928 | benign | -0.14 | Destabilizing | 0.852 | D | 0.427 | neutral | D | 0.533518117 | None | None | I |
K/V | 0.387 | ambiguous | 0.4184 | ambiguous | 0.244 | Stabilizing | 0.969 | D | 0.421 | neutral | None | None | None | None | I |
K/W | 0.7416 | likely_pathogenic | 0.7385 | pathogenic | -0.386 | Destabilizing | 0.999 | D | 0.502 | neutral | None | None | None | None | I |
K/Y | 0.6902 | likely_pathogenic | 0.6923 | pathogenic | -0.025 | Destabilizing | 0.997 | D | 0.429 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.