Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24037 | 72334;72335;72336 | chr2:178574023;178574022;178574021 | chr2:179438750;179438749;179438748 |
N2AB | 22396 | 67411;67412;67413 | chr2:178574023;178574022;178574021 | chr2:179438750;179438749;179438748 |
N2A | 21469 | 64630;64631;64632 | chr2:178574023;178574022;178574021 | chr2:179438750;179438749;179438748 |
N2B | 14972 | 45139;45140;45141 | chr2:178574023;178574022;178574021 | chr2:179438750;179438749;179438748 |
Novex-1 | 15097 | 45514;45515;45516 | chr2:178574023;178574022;178574021 | chr2:179438750;179438749;179438748 |
Novex-2 | 15164 | 45715;45716;45717 | chr2:178574023;178574022;178574021 | chr2:179438750;179438749;179438748 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs916450369 | None | 0.961 | N | 0.449 | 0.188 | 0.167679373172 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3213 | likely_benign | 0.3063 | benign | 0.012 | Stabilizing | 0.835 | D | 0.455 | neutral | N | 0.454589251 | None | None | I |
D/C | 0.8368 | likely_pathogenic | 0.8135 | pathogenic | 0.142 | Stabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | I |
D/E | 0.1881 | likely_benign | 0.1833 | benign | -0.238 | Destabilizing | 0.91 | D | 0.443 | neutral | N | 0.443988538 | None | None | I |
D/F | 0.8421 | likely_pathogenic | 0.8357 | pathogenic | -0.157 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | I |
D/G | 0.1838 | likely_benign | 0.1645 | benign | -0.114 | Destabilizing | 0.031 | N | 0.278 | neutral | N | 0.498593814 | None | None | I |
D/H | 0.474 | ambiguous | 0.4496 | ambiguous | 0.225 | Stabilizing | 1.0 | D | 0.46 | neutral | N | 0.461933085 | None | None | I |
D/I | 0.7156 | likely_pathogenic | 0.6962 | pathogenic | 0.273 | Stabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | I |
D/K | 0.5545 | ambiguous | 0.5248 | ambiguous | 0.517 | Stabilizing | 0.97 | D | 0.443 | neutral | None | None | None | None | I |
D/L | 0.7062 | likely_pathogenic | 0.6814 | pathogenic | 0.273 | Stabilizing | 0.996 | D | 0.521 | neutral | None | None | None | None | I |
D/M | 0.8242 | likely_pathogenic | 0.8145 | pathogenic | 0.245 | Stabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | I |
D/N | 0.1331 | likely_benign | 0.1356 | benign | 0.391 | Stabilizing | 0.961 | D | 0.449 | neutral | N | 0.485221872 | None | None | I |
D/P | 0.8657 | likely_pathogenic | 0.8415 | pathogenic | 0.206 | Stabilizing | 0.996 | D | 0.446 | neutral | None | None | None | None | I |
D/Q | 0.4844 | ambiguous | 0.45 | ambiguous | 0.375 | Stabilizing | 0.996 | D | 0.411 | neutral | None | None | None | None | I |
D/R | 0.6362 | likely_pathogenic | 0.6023 | pathogenic | 0.643 | Stabilizing | 0.996 | D | 0.534 | neutral | None | None | None | None | I |
D/S | 0.2136 | likely_benign | 0.2098 | benign | 0.28 | Stabilizing | 0.348 | N | 0.195 | neutral | None | None | None | None | I |
D/T | 0.4121 | ambiguous | 0.3938 | ambiguous | 0.373 | Stabilizing | 0.942 | D | 0.417 | neutral | None | None | None | None | I |
D/V | 0.4668 | ambiguous | 0.4451 | ambiguous | 0.206 | Stabilizing | 0.994 | D | 0.534 | neutral | N | 0.513755268 | None | None | I |
D/W | 0.956 | likely_pathogenic | 0.9484 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
D/Y | 0.4074 | ambiguous | 0.3787 | ambiguous | 0.067 | Stabilizing | 0.998 | D | 0.573 | neutral | N | 0.473960953 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.