Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24039 | 72340;72341;72342 | chr2:178574017;178574016;178574015 | chr2:179438744;179438743;179438742 |
N2AB | 22398 | 67417;67418;67419 | chr2:178574017;178574016;178574015 | chr2:179438744;179438743;179438742 |
N2A | 21471 | 64636;64637;64638 | chr2:178574017;178574016;178574015 | chr2:179438744;179438743;179438742 |
N2B | 14974 | 45145;45146;45147 | chr2:178574017;178574016;178574015 | chr2:179438744;179438743;179438742 |
Novex-1 | 15099 | 45520;45521;45522 | chr2:178574017;178574016;178574015 | chr2:179438744;179438743;179438742 |
Novex-2 | 15166 | 45721;45722;45723 | chr2:178574017;178574016;178574015 | chr2:179438744;179438743;179438742 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.667 | D | 0.525 | 0.546 | 0.884044859232 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69877E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2741 | likely_benign | 0.3374 | benign | -1.652 | Destabilizing | 0.104 | N | 0.429 | neutral | N | 0.493586957 | None | None | I |
V/C | 0.7403 | likely_pathogenic | 0.7907 | pathogenic | -1.247 | Destabilizing | 0.968 | D | 0.495 | neutral | None | None | None | None | I |
V/D | 0.6028 | likely_pathogenic | 0.6681 | pathogenic | -1.486 | Destabilizing | 0.667 | D | 0.58 | neutral | D | 0.537610281 | None | None | I |
V/E | 0.4518 | ambiguous | 0.518 | ambiguous | -1.313 | Destabilizing | 0.726 | D | 0.51 | neutral | None | None | None | None | I |
V/F | 0.1672 | likely_benign | 0.2072 | benign | -0.96 | Destabilizing | 0.331 | N | 0.478 | neutral | N | 0.516023306 | None | None | I |
V/G | 0.4259 | ambiguous | 0.4888 | ambiguous | -2.14 | Highly Destabilizing | 0.667 | D | 0.525 | neutral | D | 0.536849813 | None | None | I |
V/H | 0.6253 | likely_pathogenic | 0.693 | pathogenic | -1.695 | Destabilizing | 0.968 | D | 0.585 | neutral | None | None | None | None | I |
V/I | 0.067 | likely_benign | 0.0687 | benign | -0.332 | Destabilizing | None | N | 0.127 | neutral | N | 0.470051003 | None | None | I |
V/K | 0.4628 | ambiguous | 0.5113 | ambiguous | -1.316 | Destabilizing | 0.726 | D | 0.505 | neutral | None | None | None | None | I |
V/L | 0.1111 | likely_benign | 0.1255 | benign | -0.332 | Destabilizing | None | N | 0.129 | neutral | N | 0.503104783 | None | None | I |
V/M | 0.1154 | likely_benign | 0.1392 | benign | -0.413 | Destabilizing | 0.567 | D | 0.489 | neutral | None | None | None | None | I |
V/N | 0.4331 | ambiguous | 0.5063 | ambiguous | -1.478 | Destabilizing | 0.89 | D | 0.588 | neutral | None | None | None | None | I |
V/P | 0.8296 | likely_pathogenic | 0.8604 | pathogenic | -0.741 | Destabilizing | 0.89 | D | 0.539 | neutral | None | None | None | None | I |
V/Q | 0.4396 | ambiguous | 0.5021 | ambiguous | -1.357 | Destabilizing | 0.89 | D | 0.551 | neutral | None | None | None | None | I |
V/R | 0.431 | ambiguous | 0.4757 | ambiguous | -1.151 | Destabilizing | 0.726 | D | 0.587 | neutral | None | None | None | None | I |
V/S | 0.3873 | ambiguous | 0.4615 | ambiguous | -2.159 | Highly Destabilizing | 0.726 | D | 0.457 | neutral | None | None | None | None | I |
V/T | 0.2827 | likely_benign | 0.345 | ambiguous | -1.829 | Destabilizing | 0.272 | N | 0.417 | neutral | None | None | None | None | I |
V/W | 0.778 | likely_pathogenic | 0.8377 | pathogenic | -1.306 | Destabilizing | 0.968 | D | 0.625 | neutral | None | None | None | None | I |
V/Y | 0.509 | ambiguous | 0.5799 | pathogenic | -0.921 | Destabilizing | 0.726 | D | 0.519 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.