Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24045 | 72358;72359;72360 | chr2:178573999;178573998;178573997 | chr2:179438726;179438725;179438724 |
N2AB | 22404 | 67435;67436;67437 | chr2:178573999;178573998;178573997 | chr2:179438726;179438725;179438724 |
N2A | 21477 | 64654;64655;64656 | chr2:178573999;178573998;178573997 | chr2:179438726;179438725;179438724 |
N2B | 14980 | 45163;45164;45165 | chr2:178573999;178573998;178573997 | chr2:179438726;179438725;179438724 |
Novex-1 | 15105 | 45538;45539;45540 | chr2:178573999;178573998;178573997 | chr2:179438726;179438725;179438724 |
Novex-2 | 15172 | 45739;45740;45741 | chr2:178573999;178573998;178573997 | chr2:179438726;179438725;179438724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1406753487 | 0.307 | 0.892 | N | 0.497 | 0.274 | 0.288352970974 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/K | rs1406753487 | 0.307 | 0.892 | N | 0.497 | 0.274 | 0.288352970974 | gnomAD-4.0.0 | 2.73756E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31911E-05 | 3.31433E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2257 | likely_benign | 0.273 | benign | -0.703 | Destabilizing | 0.892 | D | 0.545 | neutral | N | 0.466002144 | None | None | N |
E/C | 0.881 | likely_pathogenic | 0.9004 | pathogenic | -0.188 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/D | 0.1188 | likely_benign | 0.1275 | benign | -0.57 | Destabilizing | 0.011 | N | 0.218 | neutral | N | 0.467580261 | None | None | N |
E/F | 0.8389 | likely_pathogenic | 0.8742 | pathogenic | -0.358 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
E/G | 0.2376 | likely_benign | 0.2748 | benign | -0.961 | Destabilizing | 0.892 | D | 0.568 | neutral | N | 0.496172371 | None | None | N |
E/H | 0.5824 | likely_pathogenic | 0.6317 | pathogenic | -0.278 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
E/I | 0.5556 | ambiguous | 0.6357 | pathogenic | -0.031 | Destabilizing | 0.987 | D | 0.768 | deleterious | None | None | None | None | N |
E/K | 0.2075 | likely_benign | 0.2484 | benign | 0.167 | Stabilizing | 0.892 | D | 0.497 | neutral | N | 0.461113845 | None | None | N |
E/L | 0.5566 | ambiguous | 0.629 | pathogenic | -0.031 | Destabilizing | 0.987 | D | 0.753 | deleterious | None | None | None | None | N |
E/M | 0.5481 | ambiguous | 0.6202 | pathogenic | 0.222 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/N | 0.2952 | likely_benign | 0.3454 | ambiguous | -0.362 | Destabilizing | 0.95 | D | 0.592 | neutral | None | None | None | None | N |
E/P | 0.9657 | likely_pathogenic | 0.9668 | pathogenic | -0.235 | Destabilizing | 0.987 | D | 0.653 | neutral | None | None | None | None | N |
E/Q | 0.1836 | likely_benign | 0.2098 | benign | -0.291 | Destabilizing | 0.983 | D | 0.599 | neutral | N | 0.512256545 | None | None | N |
E/R | 0.3904 | ambiguous | 0.4363 | ambiguous | 0.391 | Stabilizing | 0.987 | D | 0.628 | neutral | None | None | None | None | N |
E/S | 0.2526 | likely_benign | 0.2962 | benign | -0.534 | Destabilizing | 0.916 | D | 0.501 | neutral | None | None | None | None | N |
E/T | 0.3126 | likely_benign | 0.356 | ambiguous | -0.309 | Destabilizing | 0.975 | D | 0.607 | neutral | None | None | None | None | N |
E/V | 0.3266 | likely_benign | 0.3903 | ambiguous | -0.235 | Destabilizing | 0.983 | D | 0.703 | prob.neutral | N | 0.476815471 | None | None | N |
E/W | 0.9463 | likely_pathogenic | 0.9571 | pathogenic | -0.09 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.7162 | likely_pathogenic | 0.7676 | pathogenic | -0.082 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.