Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24050 | 72373;72374;72375 | chr2:178573984;178573983;178573982 | chr2:179438711;179438710;179438709 |
N2AB | 22409 | 67450;67451;67452 | chr2:178573984;178573983;178573982 | chr2:179438711;179438710;179438709 |
N2A | 21482 | 64669;64670;64671 | chr2:178573984;178573983;178573982 | chr2:179438711;179438710;179438709 |
N2B | 14985 | 45178;45179;45180 | chr2:178573984;178573983;178573982 | chr2:179438711;179438710;179438709 |
Novex-1 | 15110 | 45553;45554;45555 | chr2:178573984;178573983;178573982 | chr2:179438711;179438710;179438709 |
Novex-2 | 15177 | 45754;45755;45756 | chr2:178573984;178573983;178573982 | chr2:179438711;179438710;179438709 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs771209223 | -1.032 | 0.896 | D | 0.61 | 0.604 | 0.686624564747 | gnomAD-2.1.1 | 8.06E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.21199E-04 | None | 0 | 0 | 1.66279E-04 |
E/G | rs771209223 | -1.032 | 0.896 | D | 0.61 | 0.604 | 0.686624564747 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 6.21633E-04 | 0 |
E/G | rs771209223 | -1.032 | 0.896 | D | 0.61 | 0.604 | 0.686624564747 | gnomAD-4.0.0 | 3.40915E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.60046E-04 | 6.40656E-05 |
E/K | None | None | 0.026 | N | 0.411 | 0.288 | 0.406668915854 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1443 | likely_benign | 0.1468 | benign | -0.315 | Destabilizing | 0.896 | D | 0.514 | neutral | D | 0.523805343 | None | None | N |
E/C | 0.8048 | likely_pathogenic | 0.7881 | pathogenic | -0.181 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
E/D | 0.1429 | likely_benign | 0.14 | benign | -1.523 | Destabilizing | 0.011 | N | 0.253 | neutral | N | 0.46104473 | None | None | N |
E/F | 0.6942 | likely_pathogenic | 0.6891 | pathogenic | 0.512 | Stabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/G | 0.2023 | likely_benign | 0.1843 | benign | -0.791 | Destabilizing | 0.896 | D | 0.61 | neutral | D | 0.52891964 | None | None | N |
E/H | 0.4537 | ambiguous | 0.4204 | ambiguous | 0.167 | Stabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
E/I | 0.3265 | likely_benign | 0.3382 | benign | 1.009 | Stabilizing | 0.988 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/K | 0.2238 | likely_benign | 0.2143 | benign | -0.347 | Destabilizing | 0.026 | N | 0.411 | neutral | N | 0.500755125 | None | None | N |
E/L | 0.3667 | ambiguous | 0.3846 | ambiguous | 1.009 | Stabilizing | 0.976 | D | 0.671 | neutral | None | None | None | None | N |
E/M | 0.4224 | ambiguous | 0.4427 | ambiguous | 1.456 | Stabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/N | 0.2776 | likely_benign | 0.2822 | benign | -1.101 | Destabilizing | 0.851 | D | 0.527 | neutral | None | None | None | None | N |
E/P | 0.7864 | likely_pathogenic | 0.7506 | pathogenic | 0.591 | Stabilizing | 0.988 | D | 0.665 | neutral | None | None | None | None | N |
E/Q | 0.1515 | likely_benign | 0.1449 | benign | -0.82 | Destabilizing | 0.896 | D | 0.537 | neutral | N | 0.486074858 | None | None | N |
E/R | 0.3352 | likely_benign | 0.3014 | benign | -0.149 | Destabilizing | 0.952 | D | 0.561 | neutral | None | None | None | None | N |
E/S | 0.2068 | likely_benign | 0.206 | benign | -1.47 | Destabilizing | 0.919 | D | 0.472 | neutral | None | None | None | None | N |
E/T | 0.2057 | likely_benign | 0.208 | benign | -1.043 | Destabilizing | 0.976 | D | 0.625 | neutral | None | None | None | None | N |
E/V | 0.1823 | likely_benign | 0.1911 | benign | 0.591 | Stabilizing | 0.984 | D | 0.651 | neutral | N | 0.4890146 | None | None | N |
E/W | 0.8649 | likely_pathogenic | 0.8469 | pathogenic | 0.689 | Stabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
E/Y | 0.6144 | likely_pathogenic | 0.5983 | pathogenic | 0.802 | Stabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.