Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24053 | 72382;72383;72384 | chr2:178573975;178573974;178573973 | chr2:179438702;179438701;179438700 |
N2AB | 22412 | 67459;67460;67461 | chr2:178573975;178573974;178573973 | chr2:179438702;179438701;179438700 |
N2A | 21485 | 64678;64679;64680 | chr2:178573975;178573974;178573973 | chr2:179438702;179438701;179438700 |
N2B | 14988 | 45187;45188;45189 | chr2:178573975;178573974;178573973 | chr2:179438702;179438701;179438700 |
Novex-1 | 15113 | 45562;45563;45564 | chr2:178573975;178573974;178573973 | chr2:179438702;179438701;179438700 |
Novex-2 | 15180 | 45763;45764;45765 | chr2:178573975;178573974;178573973 | chr2:179438702;179438701;179438700 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 1.0 | D | 0.844 | 0.875 | 0.922313786736 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7271 | likely_pathogenic | 0.7015 | pathogenic | -1.813 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.505940019 | None | None | I |
V/C | 0.9214 | likely_pathogenic | 0.9089 | pathogenic | -1.382 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
V/D | 0.9924 | likely_pathogenic | 0.9893 | pathogenic | -1.683 | Destabilizing | 1.0 | D | 0.844 | deleterious | D | 0.621054299 | None | None | I |
V/E | 0.9857 | likely_pathogenic | 0.98 | pathogenic | -1.635 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
V/F | 0.6275 | likely_pathogenic | 0.5904 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.543864912 | None | None | I |
V/G | 0.879 | likely_pathogenic | 0.847 | pathogenic | -2.198 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.589015577 | None | None | I |
V/H | 0.9905 | likely_pathogenic | 0.9872 | pathogenic | -1.699 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
V/I | 0.0928 | likely_benign | 0.0961 | benign | -0.824 | Destabilizing | 0.997 | D | 0.547 | neutral | N | 0.478731988 | None | None | I |
V/K | 0.9858 | likely_pathogenic | 0.9797 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
V/L | 0.6159 | likely_pathogenic | 0.5779 | pathogenic | -0.824 | Destabilizing | 0.997 | D | 0.627 | neutral | D | 0.552142476 | None | None | I |
V/M | 0.6054 | likely_pathogenic | 0.5562 | ambiguous | -0.69 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
V/N | 0.9759 | likely_pathogenic | 0.9682 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
V/P | 0.9906 | likely_pathogenic | 0.9866 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
V/Q | 0.9817 | likely_pathogenic | 0.975 | pathogenic | -1.422 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
V/R | 0.9717 | likely_pathogenic | 0.9617 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
V/S | 0.908 | likely_pathogenic | 0.8844 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
V/T | 0.7921 | likely_pathogenic | 0.7499 | pathogenic | -1.75 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
V/W | 0.9917 | likely_pathogenic | 0.9892 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
V/Y | 0.9502 | likely_pathogenic | 0.9329 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.