Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24056 | 72391;72392;72393 | chr2:178573966;178573965;178573964 | chr2:179438693;179438692;179438691 |
N2AB | 22415 | 67468;67469;67470 | chr2:178573966;178573965;178573964 | chr2:179438693;179438692;179438691 |
N2A | 21488 | 64687;64688;64689 | chr2:178573966;178573965;178573964 | chr2:179438693;179438692;179438691 |
N2B | 14991 | 45196;45197;45198 | chr2:178573966;178573965;178573964 | chr2:179438693;179438692;179438691 |
Novex-1 | 15116 | 45571;45572;45573 | chr2:178573966;178573965;178573964 | chr2:179438693;179438692;179438691 |
Novex-2 | 15183 | 45772;45773;45774 | chr2:178573966;178573965;178573964 | chr2:179438693;179438692;179438691 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs372662393 | -0.19 | 1.0 | D | 0.669 | 0.462 | None | gnomAD-2.1.1 | 3.58E-05 | None | None | None | None | I | None | 1.65453E-04 | 0 | None | 0 | 1.03681E-04 | None | 0 | None | 0 | 1.57E-05 | 2.81215E-04 |
R/C | rs372662393 | -0.19 | 1.0 | D | 0.669 | 0.462 | None | gnomAD-3.1.2 | 1.05263E-04 | None | None | None | None | I | None | 2.657E-04 | 1.31096E-04 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 2.07641E-04 | 0 |
R/C | rs372662393 | -0.19 | 1.0 | D | 0.669 | 0.462 | None | gnomAD-4.0.0 | 2.29346E-05 | None | None | None | None | I | None | 2.53414E-04 | 3.33467E-05 | None | 0 | 4.47648E-05 | None | 0 | 0 | 8.47751E-06 | 2.1966E-05 | 3.20195E-05 |
R/G | None | None | 0.975 | N | 0.565 | 0.396 | 0.714588635789 | gnomAD-4.0.0 | 1.36877E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79918E-06 | 0 | 0 |
R/H | rs398124455 | -0.547 | 0.999 | N | 0.627 | 0.297 | 0.371903410333 | gnomAD-2.1.1 | 2.54087E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.19E-05 | None | 2.2244E-03 | None | 0 | 7.83E-06 | 1.40726E-04 |
R/H | rs398124455 | -0.547 | 0.999 | N | 0.627 | 0.297 | 0.371903410333 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 1.24378E-03 | 0 |
R/H | rs398124455 | -0.547 | 0.999 | N | 0.627 | 0.297 | 0.371903410333 | gnomAD-4.0.0 | 1.43185E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.23784E-05 | None | 1.56255E-05 | 0 | 1.35644E-05 | 2.24053E-03 | 1.44097E-04 |
R/L | rs398124455 | 0.345 | 0.975 | N | 0.565 | 0.366 | 0.669087604336 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
R/L | rs398124455 | 0.345 | 0.975 | N | 0.565 | 0.366 | 0.669087604336 | gnomAD-4.0.0 | 3.42202E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49805E-06 | 0 | 0 |
R/S | rs372662393 | None | 0.975 | N | 0.631 | 0.278 | 0.464270400615 | gnomAD-4.0.0 | 7.52824E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.8955E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7161 | likely_pathogenic | 0.7151 | pathogenic | 0.128 | Stabilizing | 0.953 | D | 0.631 | neutral | None | None | None | None | I |
R/C | 0.2135 | likely_benign | 0.2357 | benign | -0.219 | Destabilizing | 1.0 | D | 0.669 | neutral | D | 0.525219429 | None | None | I |
R/D | 0.9186 | likely_pathogenic | 0.912 | pathogenic | -0.249 | Destabilizing | 0.986 | D | 0.582 | neutral | None | None | None | None | I |
R/E | 0.6701 | likely_pathogenic | 0.6728 | pathogenic | -0.195 | Destabilizing | 0.91 | D | 0.635 | neutral | None | None | None | None | I |
R/F | 0.6253 | likely_pathogenic | 0.6181 | pathogenic | -0.199 | Destabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | I |
R/G | 0.6509 | likely_pathogenic | 0.6376 | pathogenic | -0.024 | Destabilizing | 0.975 | D | 0.565 | neutral | N | 0.506861685 | None | None | I |
R/H | 0.123 | likely_benign | 0.1321 | benign | -0.61 | Destabilizing | 0.999 | D | 0.627 | neutral | N | 0.515049787 | None | None | I |
R/I | 0.2962 | likely_benign | 0.2958 | benign | 0.483 | Stabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | I |
R/K | 0.124 | likely_benign | 0.1256 | benign | -0.065 | Destabilizing | 0.06 | N | 0.405 | neutral | None | None | None | None | I |
R/L | 0.3236 | likely_benign | 0.3125 | benign | 0.483 | Stabilizing | 0.975 | D | 0.565 | neutral | N | 0.51470307 | None | None | I |
R/M | 0.4093 | ambiguous | 0.4023 | ambiguous | -0.052 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | I |
R/N | 0.765 | likely_pathogenic | 0.7584 | pathogenic | -0.045 | Destabilizing | 0.986 | D | 0.602 | neutral | None | None | None | None | I |
R/P | 0.9712 | likely_pathogenic | 0.9681 | pathogenic | 0.384 | Stabilizing | 0.996 | D | 0.595 | neutral | N | 0.513863124 | None | None | I |
R/Q | 0.1298 | likely_benign | 0.1414 | benign | -0.043 | Destabilizing | 0.986 | D | 0.601 | neutral | None | None | None | None | I |
R/S | 0.7283 | likely_pathogenic | 0.7223 | pathogenic | -0.202 | Destabilizing | 0.975 | D | 0.631 | neutral | N | 0.494095724 | None | None | I |
R/T | 0.5009 | ambiguous | 0.4791 | ambiguous | -0.031 | Destabilizing | 0.986 | D | 0.579 | neutral | None | None | None | None | I |
R/V | 0.4555 | ambiguous | 0.4612 | ambiguous | 0.384 | Stabilizing | 0.993 | D | 0.603 | neutral | None | None | None | None | I |
R/W | 0.2698 | likely_benign | 0.2803 | benign | -0.408 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
R/Y | 0.4408 | ambiguous | 0.4516 | ambiguous | 0.022 | Stabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.