Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24062 | 72409;72410;72411 | chr2:178573948;178573947;178573946 | chr2:179438675;179438674;179438673 |
N2AB | 22421 | 67486;67487;67488 | chr2:178573948;178573947;178573946 | chr2:179438675;179438674;179438673 |
N2A | 21494 | 64705;64706;64707 | chr2:178573948;178573947;178573946 | chr2:179438675;179438674;179438673 |
N2B | 14997 | 45214;45215;45216 | chr2:178573948;178573947;178573946 | chr2:179438675;179438674;179438673 |
Novex-1 | 15122 | 45589;45590;45591 | chr2:178573948;178573947;178573946 | chr2:179438675;179438674;179438673 |
Novex-2 | 15189 | 45790;45791;45792 | chr2:178573948;178573947;178573946 | chr2:179438675;179438674;179438673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs893332061 | None | 0.27 | N | 0.459 | 0.305 | 0.402471007487 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs893332061 | None | 0.27 | N | 0.459 | 0.305 | 0.402471007487 | gnomAD-4.0.0 | 2.56352E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0921 | likely_benign | 0.1059 | benign | -0.53 | Destabilizing | 0.139 | N | 0.346 | neutral | N | 0.500563124 | None | None | N |
E/C | 0.6195 | likely_pathogenic | 0.627 | pathogenic | -0.087 | Destabilizing | 0.981 | D | 0.515 | neutral | None | None | None | None | N |
E/D | 0.1467 | likely_benign | 0.1576 | benign | -0.709 | Destabilizing | 0.425 | N | 0.406 | neutral | D | 0.523170624 | None | None | N |
E/F | 0.414 | ambiguous | 0.4691 | ambiguous | -0.367 | Destabilizing | 0.893 | D | 0.569 | neutral | None | None | None | None | N |
E/G | 0.143 | likely_benign | 0.1611 | benign | -0.803 | Destabilizing | 0.27 | N | 0.459 | neutral | N | 0.497141675 | None | None | N |
E/H | 0.2547 | likely_benign | 0.2669 | benign | -0.547 | Destabilizing | 0.981 | D | 0.48 | neutral | None | None | None | None | N |
E/I | 0.1278 | likely_benign | 0.143 | benign | 0.178 | Stabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
E/K | 0.106 | likely_benign | 0.115 | benign | -0.014 | Destabilizing | 0.002 | N | 0.211 | neutral | N | 0.46448768 | None | None | N |
E/L | 0.1831 | likely_benign | 0.2123 | benign | 0.178 | Stabilizing | 0.176 | N | 0.408 | neutral | None | None | None | None | N |
E/M | 0.1963 | likely_benign | 0.235 | benign | 0.497 | Stabilizing | 0.944 | D | 0.527 | neutral | None | None | None | None | N |
E/N | 0.1735 | likely_benign | 0.2019 | benign | -0.349 | Destabilizing | 0.704 | D | 0.402 | neutral | None | None | None | None | N |
E/P | 0.9363 | likely_pathogenic | 0.947 | pathogenic | -0.036 | Destabilizing | 0.828 | D | 0.494 | neutral | None | None | None | None | N |
E/Q | 0.0893 | likely_benign | 0.0931 | benign | -0.286 | Destabilizing | 0.642 | D | 0.415 | neutral | N | 0.455310837 | None | None | N |
E/R | 0.166 | likely_benign | 0.1808 | benign | 0.113 | Stabilizing | 0.543 | D | 0.417 | neutral | None | None | None | None | N |
E/S | 0.117 | likely_benign | 0.137 | benign | -0.558 | Destabilizing | 0.013 | N | 0.203 | neutral | None | None | None | None | N |
E/T | 0.0903 | likely_benign | 0.1115 | benign | -0.337 | Destabilizing | 0.004 | N | 0.245 | neutral | None | None | None | None | N |
E/V | 0.0904 | likely_benign | 0.0996 | benign | -0.036 | Destabilizing | 0.001 | N | 0.321 | neutral | N | 0.43509028 | None | None | N |
E/W | 0.7393 | likely_pathogenic | 0.7643 | pathogenic | -0.213 | Destabilizing | 0.995 | D | 0.529 | neutral | None | None | None | None | N |
E/Y | 0.3687 | ambiguous | 0.3868 | ambiguous | -0.126 | Destabilizing | 0.944 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.