Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24069 | 72430;72431;72432 | chr2:178573927;178573926;178573925 | chr2:179438654;179438653;179438652 |
N2AB | 22428 | 67507;67508;67509 | chr2:178573927;178573926;178573925 | chr2:179438654;179438653;179438652 |
N2A | 21501 | 64726;64727;64728 | chr2:178573927;178573926;178573925 | chr2:179438654;179438653;179438652 |
N2B | 15004 | 45235;45236;45237 | chr2:178573927;178573926;178573925 | chr2:179438654;179438653;179438652 |
Novex-1 | 15129 | 45610;45611;45612 | chr2:178573927;178573926;178573925 | chr2:179438654;179438653;179438652 |
Novex-2 | 15196 | 45811;45812;45813 | chr2:178573927;178573926;178573925 | chr2:179438654;179438653;179438652 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.645 | N | 0.527 | 0.494 | 0.509053020717 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78443E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0981 | likely_benign | 0.1061 | benign | -0.287 | Destabilizing | 0.645 | D | 0.594 | neutral | N | 0.488454715 | None | None | N |
E/C | 0.682 | likely_pathogenic | 0.6865 | pathogenic | -0.072 | Destabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | N |
E/D | 0.1044 | likely_benign | 0.1022 | benign | -0.302 | Destabilizing | 0.002 | N | 0.245 | neutral | N | 0.50975861 | None | None | N |
E/F | 0.507 | ambiguous | 0.5408 | ambiguous | -0.173 | Destabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | N |
E/G | 0.1287 | likely_benign | 0.1314 | benign | -0.473 | Destabilizing | 0.645 | D | 0.527 | neutral | N | 0.518537613 | None | None | N |
E/H | 0.3356 | likely_benign | 0.3406 | ambiguous | 0.125 | Stabilizing | 0.995 | D | 0.581 | neutral | None | None | None | None | N |
E/I | 0.16 | likely_benign | 0.178 | benign | 0.163 | Stabilizing | 0.945 | D | 0.656 | neutral | None | None | None | None | N |
E/K | 0.107 | likely_benign | 0.1181 | benign | 0.36 | Stabilizing | 0.645 | D | 0.563 | neutral | N | 0.490883797 | None | None | N |
E/L | 0.2014 | likely_benign | 0.2246 | benign | 0.163 | Stabilizing | 0.945 | D | 0.649 | neutral | None | None | None | None | N |
E/M | 0.2544 | likely_benign | 0.2905 | benign | 0.16 | Stabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | N |
E/N | 0.1782 | likely_benign | 0.1847 | benign | 0.048 | Stabilizing | 0.809 | D | 0.567 | neutral | None | None | None | None | N |
E/P | 0.2219 | likely_benign | 0.2146 | benign | 0.033 | Stabilizing | 0.945 | D | 0.635 | neutral | None | None | None | None | N |
E/Q | 0.1175 | likely_benign | 0.1215 | benign | 0.081 | Stabilizing | 0.864 | D | 0.54 | neutral | N | 0.488201225 | None | None | N |
E/R | 0.1903 | likely_benign | 0.1983 | benign | 0.574 | Stabilizing | 0.945 | D | 0.611 | neutral | None | None | None | None | N |
E/S | 0.1555 | likely_benign | 0.1594 | benign | -0.107 | Destabilizing | 0.547 | D | 0.559 | neutral | None | None | None | None | N |
E/T | 0.1411 | likely_benign | 0.1562 | benign | 0.046 | Stabilizing | 0.894 | D | 0.587 | neutral | None | None | None | None | N |
E/V | 0.1033 | likely_benign | 0.1164 | benign | 0.033 | Stabilizing | 0.928 | D | 0.607 | neutral | N | 0.484531149 | None | None | N |
E/W | 0.7505 | likely_pathogenic | 0.7624 | pathogenic | -0.037 | Destabilizing | 0.995 | D | 0.671 | neutral | None | None | None | None | N |
E/Y | 0.3991 | ambiguous | 0.4092 | ambiguous | 0.069 | Stabilizing | 0.995 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.