Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24070 | 72433;72434;72435 | chr2:178573924;178573923;178573922 | chr2:179438651;179438650;179438649 |
N2AB | 22429 | 67510;67511;67512 | chr2:178573924;178573923;178573922 | chr2:179438651;179438650;179438649 |
N2A | 21502 | 64729;64730;64731 | chr2:178573924;178573923;178573922 | chr2:179438651;179438650;179438649 |
N2B | 15005 | 45238;45239;45240 | chr2:178573924;178573923;178573922 | chr2:179438651;179438650;179438649 |
Novex-1 | 15130 | 45613;45614;45615 | chr2:178573924;178573923;178573922 | chr2:179438651;179438650;179438649 |
Novex-2 | 15197 | 45814;45815;45816 | chr2:178573924;178573923;178573922 | chr2:179438651;179438650;179438649 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs1709142629 | None | 0.996 | D | 0.818 | 0.682 | 0.798245613507 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/Q | rs1709142629 | None | 0.996 | D | 0.818 | 0.682 | 0.798245613507 | gnomAD-4.0.0 | 6.57272E-06 | None | None | None | None | N | None | 0 | 6.54536E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | None | None | 0.039 | N | 0.381 | 0.147 | 0.414021929199 | gnomAD-4.0.0 | 6.84521E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9973E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4521 | ambiguous | 0.4991 | ambiguous | -1.926 | Destabilizing | 0.895 | D | 0.542 | neutral | None | None | None | None | N |
L/C | 0.698 | likely_pathogenic | 0.7319 | pathogenic | -1.526 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
L/D | 0.9579 | likely_pathogenic | 0.9645 | pathogenic | -1.0 | Destabilizing | 0.997 | D | 0.825 | deleterious | None | None | None | None | N |
L/E | 0.7992 | likely_pathogenic | 0.8189 | pathogenic | -0.865 | Destabilizing | 0.992 | D | 0.818 | deleterious | None | None | None | None | N |
L/F | 0.2752 | likely_benign | 0.3186 | benign | -1.096 | Destabilizing | 0.983 | D | 0.749 | deleterious | None | None | None | None | N |
L/G | 0.8489 | likely_pathogenic | 0.8626 | pathogenic | -2.352 | Highly Destabilizing | 0.992 | D | 0.81 | deleterious | None | None | None | None | N |
L/H | 0.7133 | likely_pathogenic | 0.7443 | pathogenic | -1.311 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
L/I | 0.0814 | likely_benign | 0.0852 | benign | -0.764 | Destabilizing | 0.745 | D | 0.503 | neutral | None | None | None | None | N |
L/K | 0.7361 | likely_pathogenic | 0.7487 | pathogenic | -1.313 | Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
L/M | 0.1434 | likely_benign | 0.1488 | benign | -0.894 | Destabilizing | 0.978 | D | 0.769 | deleterious | N | 0.505137981 | None | None | N |
L/N | 0.8549 | likely_pathogenic | 0.8609 | pathogenic | -1.454 | Destabilizing | 0.997 | D | 0.823 | deleterious | None | None | None | None | N |
L/P | 0.7961 | likely_pathogenic | 0.8076 | pathogenic | -1.125 | Destabilizing | 0.996 | D | 0.827 | deleterious | D | 0.538245846 | None | None | N |
L/Q | 0.5838 | likely_pathogenic | 0.6128 | pathogenic | -1.386 | Destabilizing | 0.996 | D | 0.818 | deleterious | D | 0.534878484 | None | None | N |
L/R | 0.6545 | likely_pathogenic | 0.6811 | pathogenic | -0.955 | Destabilizing | 0.989 | D | 0.821 | deleterious | N | 0.521622848 | None | None | N |
L/S | 0.7416 | likely_pathogenic | 0.788 | pathogenic | -2.231 | Highly Destabilizing | 0.983 | D | 0.797 | deleterious | None | None | None | None | N |
L/T | 0.3985 | ambiguous | 0.4419 | ambiguous | -1.938 | Destabilizing | 0.983 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/V | 0.0969 | likely_benign | 0.1076 | benign | -1.125 | Destabilizing | 0.039 | N | 0.381 | neutral | N | 0.503318214 | None | None | N |
L/W | 0.5385 | ambiguous | 0.5986 | pathogenic | -1.145 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
L/Y | 0.6663 | likely_pathogenic | 0.7038 | pathogenic | -0.937 | Destabilizing | 0.992 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.