Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24079 | 72460;72461;72462 | chr2:178573897;178573896;178573895 | chr2:179438624;179438623;179438622 |
N2AB | 22438 | 67537;67538;67539 | chr2:178573897;178573896;178573895 | chr2:179438624;179438623;179438622 |
N2A | 21511 | 64756;64757;64758 | chr2:178573897;178573896;178573895 | chr2:179438624;179438623;179438622 |
N2B | 15014 | 45265;45266;45267 | chr2:178573897;178573896;178573895 | chr2:179438624;179438623;179438622 |
Novex-1 | 15139 | 45640;45641;45642 | chr2:178573897;178573896;178573895 | chr2:179438624;179438623;179438622 |
Novex-2 | 15206 | 45841;45842;45843 | chr2:178573897;178573896;178573895 | chr2:179438624;179438623;179438622 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs775482499 | -0.039 | 0.01 | N | 0.293 | 0.102 | 0.368554958709 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.64031E-04 | None | 0 | 0 | 0 |
K/R | rs775482499 | -0.039 | 0.01 | N | 0.293 | 0.102 | 0.368554958709 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 6.21375E-04 | 0 |
K/R | rs775482499 | -0.039 | 0.01 | N | 0.293 | 0.102 | 0.368554958709 | gnomAD-4.0.0 | 1.55153E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.74804E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3532 | ambiguous | 0.3031 | benign | -0.173 | Destabilizing | 0.648 | D | 0.582 | neutral | None | None | None | None | N |
K/C | 0.6365 | likely_pathogenic | 0.5508 | ambiguous | -0.269 | Destabilizing | 0.993 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/D | 0.5918 | likely_pathogenic | 0.5171 | ambiguous | 0.117 | Stabilizing | 0.866 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/E | 0.2005 | likely_benign | 0.1785 | benign | 0.164 | Stabilizing | 0.41 | N | 0.523 | neutral | N | 0.45542548 | None | None | N |
K/F | 0.7283 | likely_pathogenic | 0.6669 | pathogenic | -0.122 | Destabilizing | 0.98 | D | 0.671 | neutral | None | None | None | None | N |
K/G | 0.509 | ambiguous | 0.4338 | ambiguous | -0.458 | Destabilizing | 0.866 | D | 0.574 | neutral | None | None | None | None | N |
K/H | 0.243 | likely_benign | 0.2055 | benign | -0.814 | Destabilizing | 0.98 | D | 0.657 | neutral | None | None | None | None | N |
K/I | 0.2782 | likely_benign | 0.2442 | benign | 0.523 | Stabilizing | 0.908 | D | 0.698 | prob.neutral | N | 0.489116766 | None | None | N |
K/L | 0.3364 | likely_benign | 0.2959 | benign | 0.523 | Stabilizing | 0.866 | D | 0.574 | neutral | None | None | None | None | N |
K/M | 0.2105 | likely_benign | 0.1855 | benign | 0.353 | Stabilizing | 0.993 | D | 0.657 | neutral | None | None | None | None | N |
K/N | 0.3783 | ambiguous | 0.3301 | benign | 0.031 | Stabilizing | 0.83 | D | 0.618 | neutral | N | 0.489304089 | None | None | N |
K/P | 0.9088 | likely_pathogenic | 0.8823 | pathogenic | 0.322 | Stabilizing | 0.929 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/Q | 0.1222 | likely_benign | 0.1115 | benign | -0.123 | Destabilizing | 0.709 | D | 0.605 | neutral | N | 0.509278607 | None | None | N |
K/R | 0.0796 | likely_benign | 0.0749 | benign | -0.286 | Destabilizing | 0.01 | N | 0.293 | neutral | N | 0.49482923 | None | None | N |
K/S | 0.3758 | ambiguous | 0.3306 | benign | -0.548 | Destabilizing | 0.648 | D | 0.574 | neutral | None | None | None | None | N |
K/T | 0.1452 | likely_benign | 0.1251 | benign | -0.326 | Destabilizing | 0.83 | D | 0.657 | neutral | N | 0.438127798 | None | None | N |
K/V | 0.2755 | likely_benign | 0.2431 | benign | 0.322 | Stabilizing | 0.866 | D | 0.672 | neutral | None | None | None | None | N |
K/W | 0.7222 | likely_pathogenic | 0.6333 | pathogenic | -0.05 | Destabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/Y | 0.6132 | likely_pathogenic | 0.5415 | ambiguous | 0.264 | Stabilizing | 0.929 | D | 0.665 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.