Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24080 | 72463;72464;72465 | chr2:178573894;178573893;178573892 | chr2:179438621;179438620;179438619 |
N2AB | 22439 | 67540;67541;67542 | chr2:178573894;178573893;178573892 | chr2:179438621;179438620;179438619 |
N2A | 21512 | 64759;64760;64761 | chr2:178573894;178573893;178573892 | chr2:179438621;179438620;179438619 |
N2B | 15015 | 45268;45269;45270 | chr2:178573894;178573893;178573892 | chr2:179438621;179438620;179438619 |
Novex-1 | 15140 | 45643;45644;45645 | chr2:178573894;178573893;178573892 | chr2:179438621;179438620;179438619 |
Novex-2 | 15207 | 45844;45845;45846 | chr2:178573894;178573893;178573892 | chr2:179438621;179438620;179438619 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | None | N | 0.331 | 0.099 | 0.298403945805 | gnomAD-4.0.0 | 1.59775E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8735E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1556 | likely_benign | 0.1808 | benign | -0.651 | Destabilizing | 0.016 | N | 0.479 | neutral | None | None | None | None | N |
I/C | 0.5869 | likely_pathogenic | 0.6344 | pathogenic | -0.595 | Destabilizing | 0.356 | N | 0.507 | neutral | None | None | None | None | N |
I/D | 0.4532 | ambiguous | 0.4854 | ambiguous | -0.108 | Destabilizing | 0.038 | N | 0.57 | neutral | None | None | None | None | N |
I/E | 0.312 | likely_benign | 0.319 | benign | -0.204 | Destabilizing | 0.072 | N | 0.57 | neutral | None | None | None | None | N |
I/F | 0.1137 | likely_benign | 0.1394 | benign | -0.709 | Destabilizing | 0.171 | N | 0.462 | neutral | N | 0.44953687 | None | None | N |
I/G | 0.4418 | ambiguous | 0.4934 | ambiguous | -0.818 | Destabilizing | 0.038 | N | 0.575 | neutral | None | None | None | None | N |
I/H | 0.3174 | likely_benign | 0.3459 | ambiguous | -0.16 | Destabilizing | 0.356 | N | 0.573 | neutral | None | None | None | None | N |
I/K | 0.1803 | likely_benign | 0.1897 | benign | -0.288 | Destabilizing | 0.072 | N | 0.578 | neutral | None | None | None | None | N |
I/L | 0.0977 | likely_benign | 0.1169 | benign | -0.338 | Destabilizing | 0.002 | N | 0.241 | neutral | N | 0.455732124 | None | None | N |
I/M | 0.0693 | likely_benign | 0.0751 | benign | -0.319 | Destabilizing | 0.002 | N | 0.244 | neutral | N | 0.483188084 | None | None | N |
I/N | 0.145 | likely_benign | 0.1561 | benign | -0.058 | Destabilizing | None | N | 0.435 | neutral | N | 0.381330366 | None | None | N |
I/P | 0.466 | ambiguous | 0.5584 | ambiguous | -0.409 | Destabilizing | 0.356 | N | 0.593 | neutral | None | None | None | None | N |
I/Q | 0.2528 | likely_benign | 0.2613 | benign | -0.299 | Destabilizing | 0.356 | N | 0.588 | neutral | None | None | None | None | N |
I/R | 0.1492 | likely_benign | 0.1657 | benign | 0.252 | Stabilizing | 0.072 | N | 0.588 | neutral | None | None | None | None | N |
I/S | 0.1498 | likely_benign | 0.1746 | benign | -0.536 | Destabilizing | 0.012 | N | 0.587 | neutral | N | 0.384101312 | None | None | N |
I/T | 0.073 | likely_benign | 0.0953 | benign | -0.521 | Destabilizing | None | N | 0.331 | neutral | N | 0.39603046 | None | None | N |
I/V | 0.0799 | likely_benign | 0.0882 | benign | -0.409 | Destabilizing | 0.005 | N | 0.258 | neutral | N | 0.458481641 | None | None | N |
I/W | 0.5645 | likely_pathogenic | 0.6034 | pathogenic | -0.718 | Destabilizing | 0.864 | D | 0.583 | neutral | None | None | None | None | N |
I/Y | 0.3217 | likely_benign | 0.3427 | ambiguous | -0.45 | Destabilizing | 0.356 | N | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.