Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24082 | 72469;72470;72471 | chr2:178573888;178573887;178573886 | chr2:179438615;179438614;179438613 |
N2AB | 22441 | 67546;67547;67548 | chr2:178573888;178573887;178573886 | chr2:179438615;179438614;179438613 |
N2A | 21514 | 64765;64766;64767 | chr2:178573888;178573887;178573886 | chr2:179438615;179438614;179438613 |
N2B | 15017 | 45274;45275;45276 | chr2:178573888;178573887;178573886 | chr2:179438615;179438614;179438613 |
Novex-1 | 15142 | 45649;45650;45651 | chr2:178573888;178573887;178573886 | chr2:179438615;179438614;179438613 |
Novex-2 | 15209 | 45850;45851;45852 | chr2:178573888;178573887;178573886 | chr2:179438615;179438614;179438613 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.419 | 0.261 | 0.203808441222 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.22 | likely_benign | 0.1792 | benign | -0.185 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.45703524 | None | None | N |
D/C | 0.7797 | likely_pathogenic | 0.7061 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/E | 0.2469 | likely_benign | 0.1922 | benign | -0.317 | Destabilizing | 1.0 | D | 0.419 | neutral | N | 0.488800895 | None | None | N |
D/F | 0.7545 | likely_pathogenic | 0.7046 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
D/G | 0.2269 | likely_benign | 0.1789 | benign | -0.394 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.467556044 | None | None | N |
D/H | 0.4627 | ambiguous | 0.3632 | ambiguous | 0.399 | Stabilizing | 1.0 | D | 0.618 | neutral | N | 0.466024916 | None | None | N |
D/I | 0.5129 | ambiguous | 0.431 | ambiguous | 0.322 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
D/K | 0.5793 | likely_pathogenic | 0.4546 | ambiguous | 0.306 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
D/L | 0.5247 | ambiguous | 0.4578 | ambiguous | 0.322 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/M | 0.7584 | likely_pathogenic | 0.6985 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/N | 0.145 | likely_benign | 0.1221 | benign | -0.148 | Destabilizing | 1.0 | D | 0.585 | neutral | N | 0.488608894 | None | None | N |
D/P | 0.5518 | ambiguous | 0.444 | ambiguous | 0.175 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
D/Q | 0.534 | ambiguous | 0.4232 | ambiguous | -0.077 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
D/R | 0.5861 | likely_pathogenic | 0.4706 | ambiguous | 0.599 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
D/S | 0.1794 | likely_benign | 0.1485 | benign | -0.231 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
D/T | 0.3721 | ambiguous | 0.3094 | benign | -0.055 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
D/V | 0.3258 | likely_benign | 0.2755 | benign | 0.175 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | N | 0.487104912 | None | None | N |
D/W | 0.9387 | likely_pathogenic | 0.9147 | pathogenic | 0.197 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/Y | 0.3352 | likely_benign | 0.2704 | benign | 0.291 | Stabilizing | 1.0 | D | 0.658 | neutral | N | 0.483484061 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.