Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24085 | 72478;72479;72480 | chr2:178573879;178573878;178573877 | chr2:179438606;179438605;179438604 |
N2AB | 22444 | 67555;67556;67557 | chr2:178573879;178573878;178573877 | chr2:179438606;179438605;179438604 |
N2A | 21517 | 64774;64775;64776 | chr2:178573879;178573878;178573877 | chr2:179438606;179438605;179438604 |
N2B | 15020 | 45283;45284;45285 | chr2:178573879;178573878;178573877 | chr2:179438606;179438605;179438604 |
Novex-1 | 15145 | 45658;45659;45660 | chr2:178573879;178573878;178573877 | chr2:179438606;179438605;179438604 |
Novex-2 | 15212 | 45859;45860;45861 | chr2:178573879;178573878;178573877 | chr2:179438606;179438605;179438604 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1317961442 | -0.932 | 0.982 | N | 0.725 | 0.335 | 0.248417906384 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/N | rs1317961442 | -0.932 | 0.982 | N | 0.725 | 0.335 | 0.248417906384 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1317961442 | -0.932 | 0.982 | N | 0.725 | 0.335 | 0.248417906384 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4705E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1026 | likely_benign | 0.1057 | benign | -1.212 | Destabilizing | 0.046 | N | 0.485 | neutral | N | 0.46540396 | None | None | N |
T/C | 0.4706 | ambiguous | 0.434 | ambiguous | -1.092 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/D | 0.9594 | likely_pathogenic | 0.9532 | pathogenic | -1.89 | Destabilizing | 0.986 | D | 0.743 | deleterious | None | None | None | None | N |
T/E | 0.9537 | likely_pathogenic | 0.9486 | pathogenic | -1.648 | Destabilizing | 0.986 | D | 0.743 | deleterious | None | None | None | None | N |
T/F | 0.8807 | likely_pathogenic | 0.8553 | pathogenic | -0.878 | Destabilizing | 0.993 | D | 0.763 | deleterious | None | None | None | None | N |
T/G | 0.5094 | ambiguous | 0.4945 | ambiguous | -1.67 | Destabilizing | 0.91 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/H | 0.8838 | likely_pathogenic | 0.8684 | pathogenic | -1.796 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
T/I | 0.7495 | likely_pathogenic | 0.7163 | pathogenic | 0.01 | Stabilizing | 0.982 | D | 0.736 | prob.delet. | N | 0.472960222 | None | None | N |
T/K | 0.9286 | likely_pathogenic | 0.9251 | pathogenic | -0.6 | Destabilizing | 0.986 | D | 0.743 | deleterious | None | None | None | None | N |
T/L | 0.4192 | ambiguous | 0.4083 | ambiguous | 0.01 | Stabilizing | 0.953 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/M | 0.3127 | likely_benign | 0.3122 | benign | 0.009 | Stabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/N | 0.7094 | likely_pathogenic | 0.6904 | pathogenic | -1.558 | Destabilizing | 0.982 | D | 0.725 | prob.delet. | N | 0.463694285 | None | None | N |
T/P | 0.9017 | likely_pathogenic | 0.8922 | pathogenic | -0.365 | Destabilizing | 0.991 | D | 0.743 | deleterious | N | 0.467884567 | None | None | N |
T/Q | 0.8687 | likely_pathogenic | 0.8596 | pathogenic | -1.225 | Destabilizing | 0.993 | D | 0.75 | deleterious | None | None | None | None | N |
T/R | 0.8943 | likely_pathogenic | 0.8889 | pathogenic | -0.92 | Destabilizing | 0.993 | D | 0.756 | deleterious | None | None | None | None | N |
T/S | 0.2357 | likely_benign | 0.2382 | benign | -1.764 | Destabilizing | 0.374 | N | 0.481 | neutral | N | 0.449530431 | None | None | N |
T/V | 0.4257 | ambiguous | 0.3942 | ambiguous | -0.365 | Destabilizing | 0.91 | D | 0.651 | neutral | None | None | None | None | N |
T/W | 0.9802 | likely_pathogenic | 0.9753 | pathogenic | -1.076 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
T/Y | 0.9171 | likely_pathogenic | 0.897 | pathogenic | -0.674 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.