Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24102 | 72529;72530;72531 | chr2:178573828;178573827;178573826 | chr2:179438555;179438554;179438553 |
N2AB | 22461 | 67606;67607;67608 | chr2:178573828;178573827;178573826 | chr2:179438555;179438554;179438553 |
N2A | 21534 | 64825;64826;64827 | chr2:178573828;178573827;178573826 | chr2:179438555;179438554;179438553 |
N2B | 15037 | 45334;45335;45336 | chr2:178573828;178573827;178573826 | chr2:179438555;179438554;179438553 |
Novex-1 | 15162 | 45709;45710;45711 | chr2:178573828;178573827;178573826 | chr2:179438555;179438554;179438553 |
Novex-2 | 15229 | 45910;45911;45912 | chr2:178573828;178573827;178573826 | chr2:179438555;179438554;179438553 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.997 | N | 0.891 | 0.602 | 0.766578170383 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/V | rs780348282 | -1.198 | 0.117 | N | 0.416 | 0.132 | 0.380394304726 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
L/V | rs780348282 | -1.198 | 0.117 | N | 0.416 | 0.132 | 0.380394304726 | gnomAD-4.0.0 | 1.37012E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32428E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9445 | likely_pathogenic | 0.9394 | pathogenic | -3.012 | Highly Destabilizing | 0.966 | D | 0.761 | deleterious | None | None | None | None | N |
L/C | 0.9063 | likely_pathogenic | 0.9047 | pathogenic | -2.363 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.737 | Highly Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9983 | likely_pathogenic | 0.9972 | pathogenic | -3.437 | Highly Destabilizing | 0.998 | D | 0.895 | deleterious | None | None | None | None | N |
L/F | 0.7501 | likely_pathogenic | 0.7829 | pathogenic | -1.773 | Destabilizing | 0.997 | D | 0.828 | deleterious | N | 0.484013812 | None | None | N |
L/G | 0.9954 | likely_pathogenic | 0.9936 | pathogenic | -3.614 | Highly Destabilizing | 0.998 | D | 0.895 | deleterious | None | None | None | None | N |
L/H | 0.9956 | likely_pathogenic | 0.9934 | pathogenic | -3.169 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.508411944 | None | None | N |
L/I | 0.1172 | likely_benign | 0.1345 | benign | -1.204 | Destabilizing | 0.955 | D | 0.702 | prob.neutral | N | 0.468252264 | None | None | N |
L/K | 0.9962 | likely_pathogenic | 0.9925 | pathogenic | -2.362 | Highly Destabilizing | 0.998 | D | 0.884 | deleterious | None | None | None | None | N |
L/M | 0.3707 | ambiguous | 0.3892 | ambiguous | -1.335 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
L/N | 0.9984 | likely_pathogenic | 0.9972 | pathogenic | -2.985 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
L/P | 0.998 | likely_pathogenic | 0.9965 | pathogenic | -1.797 | Destabilizing | 0.999 | D | 0.899 | deleterious | N | 0.508411944 | None | None | N |
L/Q | 0.9922 | likely_pathogenic | 0.9867 | pathogenic | -2.71 | Highly Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
L/R | 0.9915 | likely_pathogenic | 0.985 | pathogenic | -2.224 | Highly Destabilizing | 0.997 | D | 0.891 | deleterious | N | 0.508411944 | None | None | N |
L/S | 0.9965 | likely_pathogenic | 0.9953 | pathogenic | -3.606 | Highly Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
L/T | 0.9806 | likely_pathogenic | 0.9757 | pathogenic | -3.15 | Highly Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | N |
L/V | 0.1329 | likely_benign | 0.1558 | benign | -1.797 | Destabilizing | 0.117 | N | 0.416 | neutral | N | 0.482104209 | None | None | N |
L/W | 0.9878 | likely_pathogenic | 0.9858 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/Y | 0.9847 | likely_pathogenic | 0.9833 | pathogenic | -2.032 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.