Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24109 | 72550;72551;72552 | chr2:178573807;178573806;178573805 | chr2:179438534;179438533;179438532 |
N2AB | 22468 | 67627;67628;67629 | chr2:178573807;178573806;178573805 | chr2:179438534;179438533;179438532 |
N2A | 21541 | 64846;64847;64848 | chr2:178573807;178573806;178573805 | chr2:179438534;179438533;179438532 |
N2B | 15044 | 45355;45356;45357 | chr2:178573807;178573806;178573805 | chr2:179438534;179438533;179438532 |
Novex-1 | 15169 | 45730;45731;45732 | chr2:178573807;178573806;178573805 | chr2:179438534;179438533;179438532 |
Novex-2 | 15236 | 45931;45932;45933 | chr2:178573807;178573806;178573805 | chr2:179438534;179438533;179438532 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs1165671355 | 0.056 | 0.995 | D | 0.625 | 0.732 | 0.581024980495 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
G/A | rs1165671355 | 0.056 | 0.995 | D | 0.625 | 0.732 | 0.581024980495 | gnomAD-4.0.0 | 4.79388E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.61307E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8575 | likely_pathogenic | 0.8478 | pathogenic | -0.264 | Destabilizing | 0.995 | D | 0.625 | neutral | D | 0.590156758 | None | None | I |
G/C | 0.9157 | likely_pathogenic | 0.9227 | pathogenic | -0.872 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.639657832 | None | None | I |
G/D | 0.9629 | likely_pathogenic | 0.9624 | pathogenic | -0.339 | Destabilizing | 0.604 | D | 0.531 | neutral | D | 0.61668425 | None | None | I |
G/E | 0.9803 | likely_pathogenic | 0.9771 | pathogenic | -0.492 | Destabilizing | 0.998 | D | 0.798 | deleterious | None | None | None | None | I |
G/F | 0.9888 | likely_pathogenic | 0.9901 | pathogenic | -0.972 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/H | 0.9873 | likely_pathogenic | 0.9863 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/I | 0.9814 | likely_pathogenic | 0.9793 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/K | 0.9892 | likely_pathogenic | 0.9865 | pathogenic | -0.7 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
G/L | 0.9831 | likely_pathogenic | 0.984 | pathogenic | -0.421 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | I |
G/M | 0.9902 | likely_pathogenic | 0.9909 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
G/N | 0.9618 | likely_pathogenic | 0.9581 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
G/P | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -0.338 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | I |
G/Q | 0.9805 | likely_pathogenic | 0.9773 | pathogenic | -0.612 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
G/R | 0.9685 | likely_pathogenic | 0.9627 | pathogenic | -0.318 | Destabilizing | 0.999 | D | 0.818 | deleterious | D | 0.63864881 | None | None | I |
G/S | 0.7527 | likely_pathogenic | 0.732 | pathogenic | -0.539 | Destabilizing | 0.999 | D | 0.766 | deleterious | D | 0.612303482 | None | None | I |
G/T | 0.9573 | likely_pathogenic | 0.947 | pathogenic | -0.616 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
G/V | 0.9701 | likely_pathogenic | 0.9674 | pathogenic | -0.338 | Destabilizing | 0.999 | D | 0.791 | deleterious | D | 0.655273584 | None | None | I |
G/W | 0.9866 | likely_pathogenic | 0.9892 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
G/Y | 0.9796 | likely_pathogenic | 0.9795 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.