Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24122 | 72589;72590;72591 | chr2:178573768;178573767;178573766 | chr2:179438495;179438494;179438493 |
N2AB | 22481 | 67666;67667;67668 | chr2:178573768;178573767;178573766 | chr2:179438495;179438494;179438493 |
N2A | 21554 | 64885;64886;64887 | chr2:178573768;178573767;178573766 | chr2:179438495;179438494;179438493 |
N2B | 15057 | 45394;45395;45396 | chr2:178573768;178573767;178573766 | chr2:179438495;179438494;179438493 |
Novex-1 | 15182 | 45769;45770;45771 | chr2:178573768;178573767;178573766 | chr2:179438495;179438494;179438493 |
Novex-2 | 15249 | 45970;45971;45972 | chr2:178573768;178573767;178573766 | chr2:179438495;179438494;179438493 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.214 | N | 0.238 | 0.116 | 0.156986980423 | gnomAD-4.0.0 | 1.38048E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80959E-06 | 0 | 0 |
R/S | None | None | 0.953 | N | 0.657 | 0.253 | 0.218112801441 | gnomAD-4.0.0 | 6.90221E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04743E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6946 | likely_pathogenic | 0.7003 | pathogenic | -0.06 | Destabilizing | 0.964 | D | 0.559 | neutral | None | None | None | None | I |
R/C | 0.2215 | likely_benign | 0.244 | benign | -0.156 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
R/D | 0.9556 | likely_pathogenic | 0.9603 | pathogenic | -0.081 | Destabilizing | 0.99 | D | 0.765 | deleterious | None | None | None | None | I |
R/E | 0.7368 | likely_pathogenic | 0.7461 | pathogenic | -0.023 | Destabilizing | 0.931 | D | 0.51 | neutral | None | None | None | None | I |
R/F | 0.8112 | likely_pathogenic | 0.8034 | pathogenic | -0.277 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | I |
R/G | 0.6594 | likely_pathogenic | 0.6928 | pathogenic | -0.251 | Destabilizing | 0.953 | D | 0.501 | neutral | N | 0.491913851 | None | None | I |
R/H | 0.2045 | likely_benign | 0.2283 | benign | -0.699 | Destabilizing | 0.998 | D | 0.598 | neutral | None | None | None | None | I |
R/I | 0.3562 | ambiguous | 0.3373 | benign | 0.406 | Stabilizing | 0.993 | D | 0.842 | deleterious | N | 0.4513997 | None | None | I |
R/K | 0.1351 | likely_benign | 0.1423 | benign | -0.106 | Destabilizing | 0.214 | N | 0.238 | neutral | N | 0.440545588 | None | None | I |
R/L | 0.4747 | ambiguous | 0.4649 | ambiguous | 0.406 | Stabilizing | 0.964 | D | 0.501 | neutral | None | None | None | None | I |
R/M | 0.487 | ambiguous | 0.4851 | ambiguous | 0.034 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | I |
R/N | 0.8636 | likely_pathogenic | 0.8749 | pathogenic | 0.184 | Stabilizing | 0.99 | D | 0.599 | neutral | None | None | None | None | I |
R/P | 0.8912 | likely_pathogenic | 0.9048 | pathogenic | 0.271 | Stabilizing | 0.995 | D | 0.849 | deleterious | None | None | None | None | I |
R/Q | 0.1759 | likely_benign | 0.1834 | benign | 0.048 | Stabilizing | 0.99 | D | 0.642 | neutral | None | None | None | None | I |
R/S | 0.7642 | likely_pathogenic | 0.7839 | pathogenic | -0.198 | Destabilizing | 0.953 | D | 0.657 | prob.neutral | N | 0.464908826 | None | None | I |
R/T | 0.4309 | ambiguous | 0.4446 | ambiguous | -0.01 | Destabilizing | 0.993 | D | 0.546 | neutral | N | 0.50378899 | None | None | I |
R/V | 0.4644 | ambiguous | 0.4474 | ambiguous | 0.271 | Stabilizing | 0.995 | D | 0.831 | deleterious | None | None | None | None | I |
R/W | 0.4691 | ambiguous | 0.5022 | ambiguous | -0.305 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
R/Y | 0.6758 | likely_pathogenic | 0.6976 | pathogenic | 0.093 | Stabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.