Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24130 | 72613;72614;72615 | chr2:178573744;178573743;178573742 | chr2:179438471;179438470;179438469 |
N2AB | 22489 | 67690;67691;67692 | chr2:178573744;178573743;178573742 | chr2:179438471;179438470;179438469 |
N2A | 21562 | 64909;64910;64911 | chr2:178573744;178573743;178573742 | chr2:179438471;179438470;179438469 |
N2B | 15065 | 45418;45419;45420 | chr2:178573744;178573743;178573742 | chr2:179438471;179438470;179438469 |
Novex-1 | 15190 | 45793;45794;45795 | chr2:178573744;178573743;178573742 | chr2:179438471;179438470;179438469 |
Novex-2 | 15257 | 45994;45995;45996 | chr2:178573744;178573743;178573742 | chr2:179438471;179438470;179438469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs376664950 | -1.657 | 0.997 | N | 0.844 | 0.34 | 0.306695030598 | gnomAD-2.1.1 | 4.62E-06 | None | None | None | None | N | None | 0 | 3.44E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs376664950 | -1.657 | 0.997 | N | 0.844 | 0.34 | 0.306695030598 | gnomAD-4.0.0 | 1.40585E-06 | None | None | None | None | N | None | 0 | 5.18968E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/S | None | None | 0.997 | D | 0.819 | 0.552 | 0.848911306636 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7481 | likely_pathogenic | 0.8132 | pathogenic | -2.102 | Highly Destabilizing | 0.966 | D | 0.675 | neutral | None | None | None | None | N |
L/C | 0.8228 | likely_pathogenic | 0.8699 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/D | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -1.909 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
L/E | 0.9879 | likely_pathogenic | 0.9881 | pathogenic | -1.698 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
L/F | 0.4543 | ambiguous | 0.622 | pathogenic | -1.165 | Destabilizing | 0.997 | D | 0.844 | deleterious | N | 0.508730881 | None | None | N |
L/G | 0.9719 | likely_pathogenic | 0.9807 | pathogenic | -2.634 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9774 | likely_pathogenic | 0.9837 | pathogenic | -2.127 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/I | 0.1087 | likely_benign | 0.1277 | benign | -0.589 | Destabilizing | 0.921 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/K | 0.9849 | likely_pathogenic | 0.9839 | pathogenic | -1.432 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
L/M | 0.1953 | likely_benign | 0.2535 | benign | -0.709 | Destabilizing | 0.997 | D | 0.798 | deleterious | N | 0.509744839 | None | None | N |
L/N | 0.9884 | likely_pathogenic | 0.9898 | pathogenic | -1.676 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.8787 | likely_pathogenic | 0.8882 | pathogenic | -1.07 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/Q | 0.963 | likely_pathogenic | 0.9687 | pathogenic | -1.53 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
L/R | 0.9711 | likely_pathogenic | 0.9722 | pathogenic | -1.291 | Destabilizing | 0.998 | D | 0.852 | deleterious | None | None | None | None | N |
L/S | 0.9574 | likely_pathogenic | 0.9718 | pathogenic | -2.436 | Highly Destabilizing | 0.997 | D | 0.819 | deleterious | D | 0.546295744 | None | None | N |
L/T | 0.82 | likely_pathogenic | 0.8707 | pathogenic | -2.072 | Highly Destabilizing | 0.995 | D | 0.783 | deleterious | None | None | None | None | N |
L/V | 0.1067 | likely_benign | 0.1353 | benign | -1.07 | Destabilizing | 0.117 | N | 0.333 | neutral | N | 0.456667913 | None | None | N |
L/W | 0.9322 | likely_pathogenic | 0.9571 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.546802723 | None | None | N |
L/Y | 0.9441 | likely_pathogenic | 0.9646 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.