Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24132 | 72619;72620;72621 | chr2:178573738;178573737;178573736 | chr2:179438465;179438464;179438463 |
N2AB | 22491 | 67696;67697;67698 | chr2:178573738;178573737;178573736 | chr2:179438465;179438464;179438463 |
N2A | 21564 | 64915;64916;64917 | chr2:178573738;178573737;178573736 | chr2:179438465;179438464;179438463 |
N2B | 15067 | 45424;45425;45426 | chr2:178573738;178573737;178573736 | chr2:179438465;179438464;179438463 |
Novex-1 | 15192 | 45799;45800;45801 | chr2:178573738;178573737;178573736 | chr2:179438465;179438464;179438463 |
Novex-2 | 15259 | 46000;46001;46002 | chr2:178573738;178573737;178573736 | chr2:179438465;179438464;179438463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs727504188 | None | 0.767 | N | 0.301 | 0.192 | 0.40722173914 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs727504188 | None | 0.767 | N | 0.301 | 0.192 | 0.40722173914 | gnomAD-4.0.0 | 5.11185E-06 | None | None | None | None | N | None | 1.37118E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.04188E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3763 | ambiguous | 0.4701 | ambiguous | -1.392 | Destabilizing | 0.998 | D | 0.564 | neutral | N | 0.518846948 | None | None | N |
V/C | 0.7912 | likely_pathogenic | 0.8327 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/D | 0.9137 | likely_pathogenic | 0.9415 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/E | 0.8553 | likely_pathogenic | 0.8906 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.549833554 | None | None | N |
V/F | 0.2677 | likely_benign | 0.3569 | ambiguous | -0.864 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/G | 0.5802 | likely_pathogenic | 0.6653 | pathogenic | -1.791 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.514586096 | None | None | N |
V/H | 0.9254 | likely_pathogenic | 0.9462 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.073 | likely_benign | 0.0766 | benign | -0.374 | Destabilizing | 0.767 | D | 0.301 | neutral | N | 0.479637986 | None | None | N |
V/K | 0.8638 | likely_pathogenic | 0.8865 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
V/L | 0.271 | likely_benign | 0.3588 | ambiguous | -0.374 | Destabilizing | 0.981 | D | 0.471 | neutral | N | 0.478133642 | None | None | N |
V/M | 0.2147 | likely_benign | 0.2901 | benign | -0.494 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/N | 0.7956 | likely_pathogenic | 0.853 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/P | 0.7425 | likely_pathogenic | 0.8303 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/Q | 0.8395 | likely_pathogenic | 0.8743 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.829 | likely_pathogenic | 0.857 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/S | 0.6162 | likely_pathogenic | 0.7012 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.5077 | ambiguous | 0.5905 | pathogenic | -1.438 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/W | 0.938 | likely_pathogenic | 0.9612 | pathogenic | -1.057 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/Y | 0.7945 | likely_pathogenic | 0.8483 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.