Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24137 | 72634;72635;72636 | chr2:178573723;178573722;178573721 | chr2:179438450;179438449;179438448 |
N2AB | 22496 | 67711;67712;67713 | chr2:178573723;178573722;178573721 | chr2:179438450;179438449;179438448 |
N2A | 21569 | 64930;64931;64932 | chr2:178573723;178573722;178573721 | chr2:179438450;179438449;179438448 |
N2B | 15072 | 45439;45440;45441 | chr2:178573723;178573722;178573721 | chr2:179438450;179438449;179438448 |
Novex-1 | 15197 | 45814;45815;45816 | chr2:178573723;178573722;178573721 | chr2:179438450;179438449;179438448 |
Novex-2 | 15264 | 46015;46016;46017 | chr2:178573723;178573722;178573721 | chr2:179438450;179438449;179438448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.055 | N | 0.479 | 0.139 | 0.0762999501168 | gnomAD-4.0.0 | 3.53603E-06 | None | None | None | None | N | None | 0 | 2.94221E-05 | None | 0 | 0 | None | 0 | 0 | 3.11896E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0531 | likely_benign | 0.062 | benign | -0.513 | Destabilizing | None | N | 0.071 | neutral | N | 0.416741301 | None | None | N |
S/C | 0.1002 | likely_benign | 0.0961 | benign | -0.596 | Destabilizing | None | N | 0.292 | neutral | None | None | None | None | N |
S/D | 0.4485 | ambiguous | 0.4875 | ambiguous | -0.955 | Destabilizing | 0.016 | N | 0.29 | neutral | None | None | None | None | N |
S/E | 0.4271 | ambiguous | 0.4683 | ambiguous | -0.985 | Destabilizing | None | N | 0.131 | neutral | None | None | None | None | N |
S/F | 0.2444 | likely_benign | 0.2956 | benign | -0.886 | Destabilizing | 0.356 | N | 0.533 | neutral | None | None | None | None | N |
S/G | 0.0956 | likely_benign | 0.0997 | benign | -0.704 | Destabilizing | 0.016 | N | 0.3 | neutral | None | None | None | None | N |
S/H | 0.4225 | ambiguous | 0.4397 | ambiguous | -1.258 | Destabilizing | 0.628 | D | 0.509 | neutral | None | None | None | None | N |
S/I | 0.1849 | likely_benign | 0.2387 | benign | -0.122 | Destabilizing | 0.016 | N | 0.445 | neutral | None | None | None | None | N |
S/K | 0.6832 | likely_pathogenic | 0.7307 | pathogenic | -0.727 | Destabilizing | 0.031 | N | 0.288 | neutral | None | None | None | None | N |
S/L | 0.1082 | likely_benign | 0.1322 | benign | -0.122 | Destabilizing | 0.012 | N | 0.439 | neutral | N | 0.48607336 | None | None | N |
S/M | 0.1711 | likely_benign | 0.1899 | benign | 0.233 | Stabilizing | 0.356 | N | 0.511 | neutral | None | None | None | None | N |
S/N | 0.1808 | likely_benign | 0.1828 | benign | -0.749 | Destabilizing | 0.072 | N | 0.336 | neutral | None | None | None | None | N |
S/P | 0.259 | likely_benign | 0.3001 | benign | -0.222 | Destabilizing | 0.055 | N | 0.479 | neutral | N | 0.497530313 | None | None | N |
S/Q | 0.4629 | ambiguous | 0.4931 | ambiguous | -1.063 | Destabilizing | 0.072 | N | 0.383 | neutral | None | None | None | None | N |
S/R | 0.6152 | likely_pathogenic | 0.669 | pathogenic | -0.486 | Destabilizing | 0.072 | N | 0.503 | neutral | None | None | None | None | N |
S/T | 0.1098 | likely_benign | 0.1242 | benign | -0.694 | Destabilizing | None | N | 0.111 | neutral | D | 0.523292763 | None | None | N |
S/V | 0.1534 | likely_benign | 0.1973 | benign | -0.222 | Destabilizing | None | N | 0.161 | neutral | None | None | None | None | N |
S/W | 0.3708 | ambiguous | 0.4167 | ambiguous | -0.879 | Destabilizing | 0.864 | D | 0.531 | neutral | None | None | None | None | N |
S/Y | 0.2279 | likely_benign | 0.2547 | benign | -0.58 | Destabilizing | 0.356 | N | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.