Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24138 | 72637;72638;72639 | chr2:178573720;178573719;178573718 | chr2:179438447;179438446;179438445 |
N2AB | 22497 | 67714;67715;67716 | chr2:178573720;178573719;178573718 | chr2:179438447;179438446;179438445 |
N2A | 21570 | 64933;64934;64935 | chr2:178573720;178573719;178573718 | chr2:179438447;179438446;179438445 |
N2B | 15073 | 45442;45443;45444 | chr2:178573720;178573719;178573718 | chr2:179438447;179438446;179438445 |
Novex-1 | 15198 | 45817;45818;45819 | chr2:178573720;178573719;178573718 | chr2:179438447;179438446;179438445 |
Novex-2 | 15265 | 46018;46019;46020 | chr2:178573720;178573719;178573718 | chr2:179438447;179438446;179438445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs776517983 | -1.264 | 0.999 | D | 0.713 | 0.423 | 0.444706120422 | gnomAD-2.1.1 | 5.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.09E-05 | None | 0 | None | 0 | 0 | 0 |
E/V | None | None | 1.0 | N | 0.78 | 0.493 | 0.567026466452 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5214 | ambiguous | 0.6121 | pathogenic | -0.751 | Destabilizing | 0.998 | D | 0.664 | neutral | N | 0.471279879 | None | None | N |
E/C | 0.9633 | likely_pathogenic | 0.9786 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/D | 0.2094 | likely_benign | 0.2435 | benign | -0.635 | Destabilizing | 0.434 | N | 0.205 | neutral | N | 0.458161062 | None | None | N |
E/F | 0.9651 | likely_pathogenic | 0.9783 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/G | 0.3839 | ambiguous | 0.4536 | ambiguous | -1.007 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | D | 0.523289976 | None | None | N |
E/H | 0.8312 | likely_pathogenic | 0.8847 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/I | 0.8574 | likely_pathogenic | 0.9047 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/K | 0.4531 | ambiguous | 0.5282 | ambiguous | -0.025 | Destabilizing | 0.998 | D | 0.579 | neutral | N | 0.468379817 | None | None | N |
E/L | 0.8259 | likely_pathogenic | 0.8804 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.85 | likely_pathogenic | 0.8939 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/N | 0.5355 | ambiguous | 0.6496 | pathogenic | -0.363 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/P | 0.9817 | likely_pathogenic | 0.9843 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/Q | 0.3369 | likely_benign | 0.3956 | ambiguous | -0.324 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.473748641 | None | None | N |
E/R | 0.6171 | likely_pathogenic | 0.6786 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/S | 0.4876 | ambiguous | 0.5873 | pathogenic | -0.582 | Destabilizing | 0.997 | D | 0.626 | neutral | None | None | None | None | N |
E/T | 0.5607 | ambiguous | 0.6528 | pathogenic | -0.371 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/V | 0.6904 | likely_pathogenic | 0.7724 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.487333446 | None | None | N |
E/W | 0.9823 | likely_pathogenic | 0.9891 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.9228 | likely_pathogenic | 0.9524 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.